Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone9ag0266 | ATGGTGGGTTCAGTATCAGTTGCTTCAATATCAGTTTTGCTAGCTTTGGTAGGCATATTAACATGTGCATGGAGAGTTCTGAACTGGGTTTGGTTCAGGCCCAAGAAGCTGGAAAAGCTGCTGAGAGAGCAAGGCCTTTCTGGAAATTCTTATCGGATTTTGTCTGGAGACATAAAGGAGAGCTCCATGATGATAGCTCAATCAACTTCTAAGCCCATCAACTTCTCACATGATATTGCACACCGAGTCATTCCATTCATCGACCAAACAGTAAAAAACTACGGTAAGAATTCTTTTATGTGGATTGGCGTGAAACCCAAAGTGAACATTATGGACCCTGAATTATTGAATATTATCTTCTCCAAGATCAATGAATTCCCAAAACCAAACTCAAATCCTCTTTTAAACTTGCTTGCGACTGGCCTTTTTACCTATGATGGCGAGAAATGGGCCAATCACAGAAAGATTATAAACCCAGCTTTCCAAATAGAGAAGTTAAAGCTTATGTTACCAGCATTCTATCAGAGTTGTGATGAGATGATAAGCAAATGGGAAAGATTGACCTCTGATCAAGATGAGTTATGTGAATTAGACGTGTTTCCTTATCTGCAAAACTTGTCAGGTGATGCTATTTCCCGAACTGCATTCGGAAGCAGTTTTGAAGAAGGCAGAAAGATTTTTGAGCTTCTAATAGAGCAAGGCAATATCGTTAGTAAGCAAGTTCTCCAGAAAGTTTACATTCCTGGATGGAGGTTTCTGCCAACGAAGACAAATAGAAGGATGAAGGAAATTGATAAAGAAATAAGAGCTTTACTCATGGGTATAATAATAAGTAAACGAGAGAAAGCAACAAAGGAAGGCAAGACTAATAATACGAACAATGACCTGTTAGGCATCCTCCTTCAATCTAATTTCAAACAAATCCGAGAACAGGGCAATAATAAGAATATGGGATTAAGTATGAGAGATGTGGTTGAGGAATGTAAGCTATTTTACTTTGCTGGGCAAGAGACAACTTCTGTTTTGCTTGTTTGGACTATGGTTTCACTCGGTAAGCATCCGGAATGGCAAGATCGAGCAAGAGCGGAAGTCTTACAAGCTTTTGGAACCAACAAACCAGACTTTGATGGTCTAAACCACCTCAAAGTTGTAACTATGATTCTTCATGAGGTTCTGAGATTATATCCACCTGTTGCTAATATGGATCGAAAAGTGCAAGATGAAACAAGACTCGGGAAATTCACATTGCCAGCAGGAGTTTTGGTAGGGTTACCCAATTTATTAATCCATCACAACAAGGAATTGTGGGGTGATGATGTAAATGAATTCAAACCAGAAAGATTTGCAGAGGGAGTTTCAAAGGCAACAAAAAACCAAATTGTGTTCTTCCCATTTGGGTGGGGTCCTCGAATTTGCATCGGTCAAAACTTTGCCATGATTGAAGCTAAAATGGCTTTGTCCCTGGTTTTACAACGCTTCTCCTTCGAGCTCTCACCATCATATGCTCATGCTCCTTTTACTGTTGTGACTCTCCAGCCACAGCATGGTGCTCATATCATCCTACGCAAAATTTAG | 1575 | 39.87 | MVGSVSVASISVLLALVGILTCAWRVLNWVWFRPKKLEKLLREQGLSGNSYRILSGDIKESSMMIAQSTSKPINFSHDIAHRVIPFIDQTVKNYGKNSFMWIGVKPKVNIMDPELLNIIFSKINEFPKPNSNPLLNLLATGLFTYDGEKWANHRKIINPAFQIEKLKLMLPAFYQSCDEMISKWERLTSDQDELCELDVFPYLQNLSGDAISRTAFGSSFEEGRKIFELLIEQGNIVSKQVLQKVYIPGWRFLPTKTNRRMKEIDKEIRALLMGIIISKREKATKEGKTNNTNNDLLGILLQSNFKQIREQGNNKNMGLSMRDVVEECKLFYFAGQETTSVLLVWTMVSLGKHPEWQDRARAEVLQAFGTNKPDFDGLNHLKVVTMILHEVLRLYPPVANMDRKVQDETRLGKFTLPAGVLVGLPNLLIHHNKELWGDDVNEFKPERFAEGVSKATKNQIVFFPFGWGPRICIGQNFAMIEAKMALSLVLQRFSFELSPSYAHAPFTVVTLQPQHGAHIILRKI | 524 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 1123186 | 1125609 | + | Conep09aG0026900.1 | Cone9ag0266 | 444429 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone9ag0266 | 524 | SUPERFAMILY | Cytochrome P450 | 79 | 522 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0266 | 524 | FunFam | Cytochrome P450 734A1 | 31 | 524 | - | - | |
| Cone9ag0266 | 524 | Gene3D | Cytochrome P450 | 61 | 524 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0266 | 524 | Pfam | Cytochrome P450 | 87 | 500 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0266 | 524 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 17 | 516 | IPR050665 | GO:0004497(PANTHER) | |
| Cone9ag0266 | 524 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 465 | 474 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone9ag0266 | 524 | PRINTS | P450 superfamily signature | 386 | 397 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0266 | 524 | PRINTS | P450 superfamily signature | 472 | 483 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0266 | 524 | PRINTS | P450 superfamily signature | 334 | 351 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0266 | 524 | PRINTS | P450 superfamily signature | 463 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0266 | 524 | PRINTS | E-class P450 group I signature | 462 | 472 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0266 | 524 | PRINTS | E-class P450 group I signature | 426 | 450 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0266 | 524 | PRINTS | E-class P450 group I signature | 91 | 110 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0266 | 524 | PRINTS | E-class P450 group I signature | 206 | 224 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0266 | 524 | PRINTS | E-class P450 group I signature | 343 | 369 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0266 | 524 | PRINTS | E-class P450 group I signature | 472 | 495 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0266 | 524 | PRINTS | E-class P450 group I signature | 323 | 340 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0266 | 524 | CDD | CYP72 | 84 | 520 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone6ag0231 | Cone-Chr6:1071493 | Cone9ag0266 | Cone-Chr9:1123186 | 0 | dispersed | |
| Cone9ag0264 | Cone-Chr9:1105061 | Cone9ag0266 | Cone-Chr9:1123186 | 6.54E-279 | dispersed | |
| Cone9ag0266 | Cone-Chr9:1123186 | Cone9ag0268 | Cone-Chr9:1136263 | 5.60E-250 | dispersed | |
| Cone9ag0265 | Cone-Chr9:1109986 | Cone9ag0266 | Cone-Chr9:1123186 | 0 | tandem | |
| Cone9ag0266 | Cone-Chr9:1123186 | Cone9ag0267 | Cone-Chr9:1127997 | 2.31E-84 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone9ag0266 | - | - | - | 0.0 |