Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0267 ATGAGTATAATAATAAGTAAACGTGAGAAAGCAACAAAGGCAGGCAAGGCTAATAATACTAGTAATGACCTGTTTGGCATCCTCCTTCGATCTAATTTCAAAGAAATCCGGGAACAGGGCAATAACAAGAATATGGGATTGAGTTTGAGAGATGTGGTTGAGGAATGTAAACTATTTTACTTCGCTGGGCAAGAGACTACTTCTGTTTTGCTTGTTTGGACTATGGTTTTACTCGGTAAGCATCCTGTGTGGCAAGATCGAGCAAAAGCGGAAGTCTTACAGGCTTTTGGAACCAACAAACCAGACTTTGACGGTCTAAGCCACCTCAAAGTTGTAACCATGATTCTTCATGAGGTTCTAAGATTATATCCAGCCATTGCTATTATTGATCGAAAAGTGCAAGATGAAACAAGACTTGGCAACTTCACATGGCCCGCTGGAGTGTTGACTTGCACAGTTAAGATGGATCTTACATGCTGTAAAGAGTGTCCATTATTACTGAAAAAGAAGTTGAAGAAAACTCTTGGAGTGGAATCTGCAACTATCGACCCGAAGCAAGGGATGGTAACCATTAATGGTGACATAGATCCTATGAAGCTTATAGAGATGTTAAGAAAGATGGGCAAGGAAGTTGAGCTTTGGTCTTTTCAAAAACAATCGTCACCTGTAACAGGTTGCAAAGGCAAAGACAAGGCTTGTAACAGTTCTCATGAAAAGAACAGCATCAATATTGCCTGTGATCATCATGCGCATGATTATAAGAGCGTGCAGGTGGGATCGACCAAGGTAAAGAAATTAATCGGTGGGTTCGGGTCTTTGGACTTGTTTGGCAAGCAAAAAAAGGAACCTAATTTCACGAGCAGATCTTTCGCCCCACCAAGAATGAATTTTGGTGGTTATAATGGGAACCCTTATCGGTATCCGATGCCTCAATATCAGCCCGAACGACCATACGATATGCCTTTGAGGCCATATTATCCTCCTATGATGCACTGCAGCATGCCACTACCGCCTTATGGTTATAACTACCGTCCACCTCCACTGGCATCAGCTTTCTCGGGCCAATATGCACATCCTCAGCCATCTATGAGACACTATACAAGCGATGCCGATAACTATCATTTTGATTATTAG 1134 42.06 MSIIISKREKATKAGKANNTSNDLFGILLRSNFKEIREQGNNKNMGLSLRDVVEECKLFYFAGQETTSVLLVWTMVLLGKHPVWQDRAKAEVLQAFGTNKPDFDGLSHLKVVTMILHEVLRLYPAIAIIDRKVQDETRLGNFTWPAGVLTCTVKMDLTCCKECPLLLKKKLKKTLGVESATIDPKQGMVTINGDIDPMKLIEMLRKMGKEVELWSFQKQSSPVTGCKGKDKACNSSHEKNSINIACDHHAHDYKSVQVGSTKVKKLIGGFGSLDLFGKQKKEPNFTSRSFAPPRMNFGGYNGNPYRYPMPQYQPERPYDMPLRPYYPPMMHCSMPLPPYGYNYRPPPLASAFSGQYAHPQPSMRHYTSDADNYHFDY 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1127997 1130653 + Conep09aG0027000.1 Cone9ag0267 444430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0267 377 PRINTS P450 superfamily signature 62 79 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone9ag0267 377 PRINTS P450 superfamily signature 114 125 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone9ag0267 377 Pfam Heavy-metal-associated domain 160 210 IPR006121 GO:0046872(InterPro)
Cone9ag0267 377 Gene3D - 152 212 - -
Cone9ag0267 377 Pfam Cytochrome P450 6 148 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone9ag0267 377 ProSiteProfiles Heavy-metal-associated domain profile. 148 212 IPR006121 GO:0046872(InterPro)
Cone9ag0267 377 SUPERFAMILY Cytochrome P450 6 149 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone9ag0267 377 PANTHER CYTOCHROME P450 FAMILY MEMBER 4 152 IPR050665 GO:0004497(PANTHER)
Cone9ag0267 377 SUPERFAMILY HMA, heavy metal-associated domain 158 215 IPR036163 GO:0046872(InterPro)
Cone9ag0267 377 Gene3D Cytochrome P450 1 151 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone9ag0266 Cone-Chr9:1123186 Cone9ag0267 Cone-Chr9:1127997 2.31E-84 tandem
Cone9ag0267 Cone-Chr9:1127997 Cone9ag0268 Cone-Chr9:1136263 1.78E-59 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0267 - - - 0.0