Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0269 ATGTCACAAATTCAACAGCTTAAGCCATTCTTCTTCTTCCTCCTCCTTTTGCTACCTGCACTACTTGTTTCGAGCGAGTGCCAGTGCGACAAATCGGAGGATGACCCCAAACACAACAATAAGGCTCTATCTCTTAAATACAGGGTAGTAGGCATCGCCGCGATATTAATAGCCGGTGCACTGGGTGTATGCTTCCCACTTCTCGGGAAAACAATTCCAGCTCTAAGCCCCGAAAAAGACATCTTCTTCGTAATCAAAGCCTTTGCAGCGGGCGTCATATTGGCAACCGGATTCATCCATGTCTTGCCCGATGCTTTCGAGAGGCTGACTTCACCCTGTCTCGGCGACAAACCGTGGCAAGATTTTCCGTTTACGGGTTTTGTGGCAATGGTTTCTGCTATTGTGACTCTAATGATTGATTCTTTTGCTACTTCTTATTTCAATAAGATTCACTTTAGTAACACCAAGTCCGACAGGCCTAATGATAAGGGCATTGATGTCGTTAACGACGAGGGAGAACATGCTGATCATGTACATGTTCATACACATGCAACTCATGGTCATGCTCATGGTGCTAGTATTGATCATAACTCGGCTTCATTGCAACTTCTTAGACACCGAGTTATATCTCAAGTTTTGGAGTTGGGAATTGTGGTACATTCATTAATAATAGGAATATCGTTAGGAGCCTCCGAAAGTCCGGCCACCATAAGACCTCTCGTCGCGGCTCTCACCTTTCATCAATTTTTCGAGGGAATGGGACTGGGCGGATGCATCTCTCAGGCAAAATTCAAAAATGGGGCTGTTTTGATGATGATACTGTTCTTCTCTCTTACAACTCCAGTTGGGATAGCAATAGGAATAGGGATATCTAATGGTTATGATGACAACAGTAAAACTGCACTTATAGTTGAAGGGGTGTTTGATTCTGCATCAGCTGGGATCTTGATCTACATGGCGTTGGTGGATCTTCTTGCTTCTGATTTTATGAGTCCAAGGATGCAAAGCAATGGGAAGCTTCAATTTGCAGCCAATTTGTCTCTTCTTTTAGGAGCTGGTTGTATGTCTCTCTTAGCCAAGTGGGCTTAA 1089 44.08 MSQIQQLKPFFFFLLLLLPALLVSSECQCDKSEDDPKHNNKALSLKYRVVGIAAILIAGALGVCFPLLGKTIPALSPEKDIFFVIKAFAAGVILATGFIHVLPDAFERLTSPCLGDKPWQDFPFTGFVAMVSAIVTLMIDSFATSYFNKIHFSNTKSDRPNDKGIDVVNDEGEHADHVHVHTHATHGHAHGASIDHNSASLQLLRHRVISQVLELGIVVHSLIIGISLGASESPATIRPLVAALTFHQFFEGMGLGGCISQAKFKNGAVLMMILFFSLTTPVGIAIGIGISNGYDDNSKTALIVEGVFDSASAGILIYMALVDLLASDFMSPRMQSNGKLQFAANLSLLLGAGCMSLLAKWA 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1146817 1148424 - Conep09aG0027200.1 Cone9ag0269 444432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0269 362 Pfam ZIP Zinc transporter 46 359 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cone9ag0269 362 NCBIfam ZIP zinc/iron transport family 32 362 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Cone9ag0269 362 PANTHER ZINC/IRON TRANSPORTER 42 361 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0346 Cone-Chr1:2820188 Cone9ag0269 Cone-Chr9:1146817 2.47E-105 dispersed
Cone4ag1663 Cone-Chr4:12488667 Cone9ag0269 Cone-Chr9:1146817 1.05E-84 dispersed
Cone5ag1488 Cone-Chr5:9992994 Cone9ag0269 Cone-Chr9:1146817 2.58E-102 dispersed
Cone6ag0216 Cone-Chr6:1023737 Cone9ag0269 Cone-Chr9:1146817 8.44E-133 dispersed
Cone7ag0057 Cone-Chr7:249044 Cone9ag0269 Cone-Chr9:1146817 2.86E-70 dispersed
Cone9ag0247 Cone-Chr9:1053571 Cone9ag0269 Cone-Chr9:1146817 8.50E-128 dispersed
Cone8ag1604 Cone-Chr8:11878688 Cone9ag0269 Cone-Chr9:1146817 9.63E-132 transposed
Cone6ag0233 Cone-Chr6:1078537 Cone9ag0269 Cone-Chr9:1146817 2.81E-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0269 K14709 - vvi:100255284 452.595