Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0296 ATGGTAGAGTGCAAGTCCATGGAGTTGGAGGATTATGAGGAGGGCGTTGTAGTTCGAAAATTATGTGCACGTGGAATCTGGATACATACAACAGAAGTTGAAGCAAGGCTCGACGAGGGAAATATTCAAGAAGCAGAATCTGCATTACGAGAGGGCCTATCTTTAAACTTTGAGGAAGCAAGATCCCTTCTTGGAAAATTAGAGTATCAAAGAGGCAATGTAGAAGGTGCCCTTCGTGTTTTTGATGGCATAGATCTCCATGCAGCCATTCAGAGATTACAGCCTTCCGTTTCTGAGAAGGCGCCTTCAAAAAAGGCTCGTTCTCGCACTGAATCTCAGGATGCAGTCTCACAGCATTCTGCTAACCTAGTGCTTGAAGCGATATATCTAAAAGCAAAATCTCTTCAAAAGCTTGGGAAATTGAATGAGGCTGCGAGTGAGTGTAAAAGCGTACTTGATGCAGTGGAGAAGATATTCCATCTTGGCATACCTGATGAGCAAGTGGACAGTAGATTGCAAGAGACGGTCAGCCAAGCTGTAGAGCTCCTTCCTGAGCTTTGGAAGCAAGCAGGTCATTACCAGGAAGCAATACTGGCCTATAGACGAGCCCTCCTAAGTAAATGGAACCTTGATAATGATTGTTGTGCAAGGATTCAGAAAGGGTTTGCTGTGTTTTTGCTATATAGTGGAGTAGAGGCCAGCCCTCCTAGTTTAGCTGCTCAGGTTGAAGGTTCATTTGTACCCAAAAACAATATGGAGGAGGCGATTCTACTTTTGATGGTTCTTTTAAGAATATTTTTCCCTGGTAGAATAAAGTGGGACCCATCGGTTATGGAGCATCTTACATTCGCACTATCTCTGTGCAACCAAACTTCCGGATTAGCAAAGCAACTTGAAGAAATCATGCCTGGAGTCTATCAACGTGTGGATCGATGGAAGTCTTTAGCTCTTTGTCATAGTGGGGCCGGACAAAATAAAGCTTCTTTGAATGTATTGAGAAAGTCGTTACACAAACATGAACTACCAGATGATGTAATGACATTGTTGTTAGCTGCTAAAGTATGTAGTGACGATCCTTATCTTGCTGCAGAAGGGGTTGGATATGCAAGAAGGGCAATTAGCAATGCAACAGGAAAAGAAGAGCATTTAAAGGGTGTGGGCCTACGCTTGTTAGGTCTTTGTTTGGGAAAGCAAGCCAAGGTTTCTTCCTCTGACTTTGACAGATCCCGTCTCCAATCTGCGGCATTGAAGTCGCTAGAAGGAGCAACTTCTTTGGAACATAATAATTTAGATCTGATATTTGAATTAGGTATTCAATATGCAGAACAGAGGAATCTGAATGTCGCTTTGCGGTATGCAAAGAAGTATATTGATGAAACAGGTGGCTCTGTCTTAAAGGGATGGAGGTTGCTTGCTCTTATTTTGTCCGCTCAAAAGCGCTTTTCAGAGGCTGAAGTGGTCACGGATGCTGCTTTAGATGAGACCGTTAAATGGAACCAAGGACCGCTTCTTAGACTTAAGGCAAAGCTGAAGATCTCTCAGTCGCTACACATGGATGCCATTGAGGCTTACCGATACCTCCTTGCATTAGTCCAGGCCCAAAGGAAATCATTTGGACCTCTATCAATCGCTCCTCGGGTTGAGGATGATGAGGTCAATGAATTTGAAGTTTGGAATGGCTTAGCAAATCTCTACTCGAGCCTCTCACATTGGAAAGATGCAGGGGTGTGTTTGGGAAAAGCCAGAGAGCTTAAGCCATTCTCTCCCGAAATGCTGCATACGGAAGGCGTTATGTGTCAAGGACGTGGTCAAATCCAAGAGGCTTTCATCGCTTATGTGAATGCCCTTCTATTGGAACCGTGTTATGTTCCTTGCAAGATTTTGGTTGCTTCTCTCTTATCAAAACTGAGTTCAAAGGCATCTCCTGTATCAAGAAGCTTACTCTCAGATGCTTTGAGGTTAGAGCCTACTAATCCTAAGGCTTGGTATTTCTTGGGGAGTATTCATCGAGATGATGGAAGAATATCGGATGCTGCAGATTGCTTCCAGGCTGCTTCCATGCTTGAAGAAGCCGATCCCATCGAAAGTTTTGGCAACATTCTCTGA 2106 43.83 MVECKSMELEDYEEGVVVRKLCARGIWIHTTEVEARLDEGNIQEAESALREGLSLNFEEARSLLGKLEYQRGNVEGALRVFDGIDLHAAIQRLQPSVSEKAPSKKARSRTESQDAVSQHSANLVLEAIYLKAKSLQKLGKLNEAASECKSVLDAVEKIFHLGIPDEQVDSRLQETVSQAVELLPELWKQAGHYQEAILAYRRALLSKWNLDNDCCARIQKGFAVFLLYSGVEASPPSLAAQVEGSFVPKNNMEEAILLLMVLLRIFFPGRIKWDPSVMEHLTFALSLCNQTSGLAKQLEEIMPGVYQRVDRWKSLALCHSGAGQNKASLNVLRKSLHKHELPDDVMTLLLAAKVCSDDPYLAAEGVGYARRAISNATGKEEHLKGVGLRLLGLCLGKQAKVSSSDFDRSRLQSAALKSLEGATSLEHNNLDLIFELGIQYAEQRNLNVALRYAKKYIDETGGSVLKGWRLLALILSAQKRFSEAEVVTDAALDETVKWNQGPLLRLKAKLKISQSLHMDAIEAYRYLLALVQAQRKSFGPLSIAPRVEDDEVNEFEVWNGLANLYSSLSHWKDAGVCLGKARELKPFSPEMLHTEGVMCQGRGQIQEAFIAYVNALLLEPCYVPCKILVASLLSKLSSKASPVSRSLLSDALRLEPTNPKAWYFLGSIHRDDGRISDAADCFQAASMLEEADPIESFGNIL 701
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1275625 1279234 - Conep09aG0029900.1 Cone9ag0296 444459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0296 701 Gene3D Tetratricopeptide repeat domain 499 641 IPR011990 GO:0005515(InterPro)
Cone9ag0296 701 PANTHER PROTEIN NPG1 28 698 IPR043376 -
Cone9ag0296 701 SUPERFAMILY TPR-like 505 688 IPR011990 GO:0005515(InterPro)
Cone9ag0296 701 Gene3D Tetratricopeptide repeat domain 644 697 IPR011990 GO:0005515(InterPro)
Cone9ag0296 701 Gene3D Tetratricopeptide repeat domain 21 207 IPR011990 GO:0005515(InterPro)
Cone9ag0296 701 ProSiteProfiles TPR repeat profile. 659 692 IPR019734 GO:0005515(InterPro)
Cone9ag0296 701 Pfam Tetratricopeptide repeat 644 685 - -
Cone9ag0296 701 Pfam Tetratricopeptide repeat 32 83 - -
Cone9ag0296 701 SMART tpr_5 659 692 IPR019734 GO:0005515(InterPro)
Cone9ag0296 701 SMART tpr_5 309 342 IPR019734 GO:0005515(InterPro)
Cone9ag0296 701 SMART tpr_5 555 588 IPR019734 GO:0005515(InterPro)
Cone9ag0296 701 SMART tpr_5 465 498 IPR019734 GO:0005515(InterPro)
Cone9ag0296 701 SMART tpr_5 589 622 IPR019734 GO:0005515(InterPro)
Cone9ag0296 701 SMART tpr_5 125 158 IPR019734 GO:0005515(InterPro)
Cone9ag0296 701 SUPERFAMILY TPR-like 37 486 IPR011990 GO:0005515(InterPro)
Cone9ag0296 701 Gene3D Tetratricopeptide repeat domain 250 497 IPR011990 GO:0005515(InterPro)
Cone9ag0296 701 SUPERFAMILY TPR-like 56 206 IPR011990 GO:0005515(InterPro)
Cone9ag0296 701 MobiDBLite consensus disorder prediction 96 115 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0348 Cone-Chr4:1595449 Cone9ag0296 Cone-Chr9:1275625 1.80E-209 dispersed
Cone7ag1333 Cone-Chr7:9733989 Cone9ag0296 Cone-Chr9:1275625 4.43E-20 dispersed
Cone7ag1335 Cone-Chr7:9735316 Cone9ag0296 Cone-Chr9:1275625 4.11E-51 dispersed
Cone6ag0261 Cone-Chr6:1199416 Cone9ag0296 Cone-Chr9:1275625 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0296 K21843 - csv:101206641 1090.87