Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0327 ATGGGCACCTCTCAAGCGTTGTGGCTTTTTCATATTCTACTCATTTGTATAATAATAAATAAATGCAGCAGTCTCAGTGCTGATGGTGAAGCACTTTTAGGTTTTAGGACATTGGTTGTTAGTTCCCATAGTGTCCTTCTTCAATGGAGACCAGAGGATCCCAACCCATGTAGTTGGAAAGGTGTGACATGTGACACAAAAACCAAGAGAGTAATATCTTTGAATCTTTCCTATCAGAGACTTAGTGGATATATATCCCCGGACCTTGGGAAGCTAGGGCAACTGACCAATTTAAAACTTAATAACAACAATTTCTATGGGACAATTCCATCAGAATTGGGAAATTGCTTGCAGTTGCACGGATTATTTCTACAGGGTAATTACTTGAGTGGAACAATCCCCCAAGAACTGGGTAATCTTTCAGAGCTAGAAAATCTAGATATCTCAAGCAACTCACTCAGTGGAAATATCCCACCATCACTTGGAAAGTTGAATAAGCTTGTCACTTTCAATGTATCAAGCAATTTTCTTGTTGGGCAAATACCGACTGATGGTGTGCTTATCAACTTTTCCGAAAGCTCCTTTGATGGAAACCGTGGGTTGTGTGGGAAGCAAATCAGTGTGACATGTAAGGATAACAGTGGAGTACCTGGAACGGATCCCCAATCGCCCAACTCAGGCCAAAATCAAGGTGGAAGGAAAAACTCAGGTCGGCTCTTTACCAGTGCATCAGCAACTGTCGGTGCACTACTTCTGGTTGCACTTATGTGTTTCTGGGGTTGCTTTCTTTATAAGAAGTTTGGTAAAAATGACAGTAAAGGTCTAGCAATTGATGTTTGTGGAGGTGCATCAGTAGTAATGTTTCATGGAGACCTACCCTACTCTTCAAAAGACATCATTAAGAAATTGGAAACTTTGAATGAAGAACACATAATAGGTTGTGGGGGCTTTGGAACAGTATACAGACTTGTAATGGATGATGGCAATGTCTTTGCTTTGAAAAGAATTGTAAAGATGAATGAGGGGTTTGATCGTTCTTTCGAAAGAGAGCTATTGATTCTTGGAAGCCTAAAACATCGCTACTTGGTCAATTTGCGAGGATATTGCAATTCTCCTACATCTAAATTATTAATTTATGATTTCCTACCCGGTGGTAGCCTTGACGAGGCCCTTCATGAGAGATCAGAGCAACTTGACTGGGATGCTCGTTTGAATATTATCATGGGAGCAGCAAAAGGGCTGGCATACTTGCATCATGATTGTTCACCTAGGGTCATACACCGTGACATAAAGTCGAGCAACATTTTGCTAGATGGCAATCTGGAGGCTCGAGTTTCTGACTTTGGACTTGCCAAAGTTTTGGAAGACGAAGAATCTCATATCACAACCATTGTTGCTGGAACATTTGGCTACCTGGCTCCTGAGTATATGCAGAGTGGTAGAGCAACTGAAAAGACAGATGTGTACAGTTTTGGGGTTCTAGTTCTTGAAGTTATAAGCGGCAAACGACCTACTGATGCATCCTTCATCGAGAAGGGCCTCAACATTGTGGGTTGGTTAAACTTTCTGGTCACTGAGAACAGAGAAAGAGATATCATTGATCCACATTGTGAAGGGGTGGAGGAAGAAAGCCTTGATGCCTTGCTCTCTATAGCCATACAGTGTGTTTCTTCTAGCCCCGACGAAAGACCAACCATGCACAGAGTTATCCAGATACTGGAATCGGAGGTTATGACACAATGCCTCAGTGACTTTTGCGGTTCCAGCTTGGACTAA 1776 42.06 MGTSQALWLFHILLICIIINKCSSLSADGEALLGFRTLVVSSHSVLLQWRPEDPNPCSWKGVTCDTKTKRVISLNLSYQRLSGYISPDLGKLGQLTNLKLNNNNFYGTIPSELGNCLQLHGLFLQGNYLSGTIPQELGNLSELENLDISSNSLSGNIPPSLGKLNKLVTFNVSSNFLVGQIPTDGVLINFSESSFDGNRGLCGKQISVTCKDNSGVPGTDPQSPNSGQNQGGRKNSGRLFTSASATVGALLLVALMCFWGCFLYKKFGKNDSKGLAIDVCGGASVVMFHGDLPYSSKDIIKKLETLNEEHIIGCGGFGTVYRLVMDDGNVFALKRIVKMNEGFDRSFERELLILGSLKHRYLVNLRGYCNSPTSKLLIYDFLPGGSLDEALHERSEQLDWDARLNIIMGAAKGLAYLHHDCSPRVIHRDIKSSNILLDGNLEARVSDFGLAKVLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVISGKRPTDASFIEKGLNIVGWLNFLVTENRERDIIDPHCEGVEEESLDALLSIAIQCVSSSPDERPTMHRVIQILESEVMTQCLSDFCGSSLD 591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1427234 1431862 + Conep09aG0033000.1 Cone9ag0327 444490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0327 591 ProSitePatterns Protein kinases ATP-binding region signature. 312 338 IPR017441 GO:0005524(InterPro)
Cone9ag0327 591 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 280 381 - -
Cone9ag0327 591 Gene3D Transferase(Phosphotransferase) domain 1 382 584 - -
Cone9ag0327 591 Pfam Protein kinase domain 308 571 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag0327 591 SMART serkin_6 306 578 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag0327 591 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 14 136 IPR050647 -
Cone9ag0327 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone9ag0327 591 Pfam Leucine Rich Repeat 143 164 IPR001611 GO:0005515(InterPro)
Cone9ag0327 591 Pfam Leucine Rich Repeat 94 116 IPR001611 GO:0005515(InterPro)
Cone9ag0327 591 Pfam Leucine Rich Repeat 119 140 IPR001611 GO:0005515(InterPro)
Cone9ag0327 591 Gene3D Ribonuclease Inhibitor 25 212 IPR032675 -
Cone9ag0327 591 Gene3D Phosphorylase Kinase; domain 1 283 381 - -
Cone9ag0327 591 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Cone9ag0327 591 SUPERFAMILY L domain-like 23 189 - -
Cone9ag0327 591 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 187 - -
Cone9ag0327 591 SUPERFAMILY Protein kinase-like (PK-like) 292 573 IPR011009 -
Cone9ag0327 591 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 382 584 - -
Cone9ag0327 591 MobiDBLite consensus disorder prediction 213 235 - -
Cone9ag0327 591 ProSiteProfiles Protein kinase domain profile. 306 578 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0874 Cone-Chr6:4465526 Cone9ag0327 Cone-Chr9:1427234 8.00E-285 dispersed
Cone9ag0327 Cone-Chr9:1427234 Cone9ag0880 Cone-Chr9:4293527 6.60E-281 dispersed
Cone6ag0292 Cone-Chr6:1342560 Cone9ag0327 Cone-Chr9:1427234 0 wgd
Cone6ag0332 Cone-Chr6:1569748 Cone9ag0327 Cone-Chr9:1427234 1.74E-68 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83163 PF00067 p450 6.70E-90 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0327 - - - 0.0