Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0364 ATGGCGGAAGTGACGGGACTGATGCTTCCTTACAGGCTATTAGAAGAAGACGTTTCTATTTCTGATTCATCGACTTCTGATCCGACTGATGCGGTGCTTTTCGTCGGGCTTTGTCTGGTTCTCGGGATCGCGAGTAGGCAGCTCTTGCGAGGGACCAGAGTGCCTTACACCGTCGCTTTGCTTATCATCGGCATTGCTCTAGGCTCCATAGAGTATGGTACCCATCATCAACTGGGAAAGATTGGAGATGGAATCCGTCTTTGGGCGAGTATTGACCCTGATCTTCTATTGGCCGTTTTTCTTCCTGCTCTTCTTTTTGAGAGTTCTTTCTCAATGGAGGTGCACCAGATAAAGAGGTGTATTGTTCAAATGATTTTACTAGCTGGTCCAGGCGTTCTAATTTCAACCTTCTGTCTCGGATCTCTTCTGAAGCTCACTTTCCCTTATGACTGGAGCTGGAAAACATCAATGTTGCTTGGGGGGCTTTTGAGTGCCACTGATCCTGTGGCTGTTGTTGCTCTGCTGAAAGAACTCGGTGCAAGCAAAAAGTTGAGTACGATAATAGAAGGAGAGTCTTTGATGAATGATGGGACAGCAATTGTGGTGTACCAGCTGTTTTATAGAATGGTACTGGGGAGTACCTTTAACTGGGCGAGCATACTTAAATTTTTAGCTGAAGTTTCACTGGGAGCTGTAGGAATTGGTCTTGCTTTTGGGATCGCATCTGTCTTGTGGCTTGGATTTATTTTCAATGACACAGTCATAGAGATCACACTAACACTTGCTGTGAGCTATATCGCTTACTACACTGCTCAAGAGGGGGTTGACGTATCTGGTGTCTTGACAGTCATGACCTTAGGAATGTTTTATGCTGCAGTTGCTCGGACAGCTTTTAAGGGTGATGGCCAAAAAACCTTGCATCATTTTTGGGAAATGGTGGCGTACATCGCTAATACTTTAATTTTCATTTTGAGTGGAGTTGTTATAGCTGAAGGTGTTCTTAGCAGTGAAGATATTTTTGACCATGGAACTTCCTGGGCGTATCTTGTTCTACTTTATGTTTATGCACAAGTTTCTCGGCTTCTAGTTGTTGGAACATTGTTCCCCTTTCTTCGTCACTTCGGATATGGTTTGGACTGGAGAGAAGCTACTATTCTCTCATGGTCAGGATTGCGAGGAGCTGTTGCTTTATCGCTCTCGTTATCTGTTAAGCGTACAAGTGACAGCTCCTCATATATCAGTTCAGAAACAGGAACTCTGTTTGTGTTTCTCACTGGAGGGATTGTCTTCTTGACGCTTATTGTGAACGGTTCAACCACACAGTTTGTTTTACATCTCTTACATATGGATAAACTCTCAGCAGCAAAGAAGCGTATATTGGAGTACACCAAGTATGAGATGTTGAACAAAGCACTGGAGGCATTTGGTGATCTTGGAGATGATGAGGAATTGGGACCCACTGATTGGCCTACAGTTAAAAGATATATCACTTGCCTCAATCAGGTGGAGGGTGAAGCTGTTCACCCTCACGATGCAGCTGAAAGTGAAAATAGTCTGAACCATATGAATTTGAAGGACATTCGCATACGGTTTTTGAATGGTGTTCAAGCTGCTTACTGGGAGATGCTTGATGAGGGAAGGATAACACAAACTATTGCCAATATGTTGATGCAATCAGTGGATCAGGCCCTTGATTTGGTTTCACATGAGCCTTTGGGTGATTGGAAAGGTTTAAAATCTAATATTCATTTTCCAAGTTATTACAAGTTTCTTCAGACAAGTATTTTCCCACAGAAGTTGGCTACATATTTCATGGTGGAAAGGTTAGAATCTGCATGCTCTATCTGTGCTGCATTTCTCCGAGCCCATAGAATTGCAAGAAGACAGCTGCACGACTTCATAGGTGAAAGTGACGTTGCATCTACCATTATTAGTGAAAGTGAGAATGAAGGTGAAGAAGCAAGACAATTCCTGGAAGAAGTTCGTGTGACGTTTCCCCAGGTTTTGCGTGTTGTGAAAACAAGACAAGTAACATATTCAGTGCTTAACCATCTAATTGAGTATGTCGAAAATCTTGAGAAGGTTGGTTTGTTAGAAGAAAAGGAGATGCTTCATCTCCATGATGCTGTCCAGACCGACTTAAAAAAGTTATTAAGGAATCCACCATTAGTAAAGGTTCTGAAAGTAAGAGATCTAATCGAGGCCCATCCATTGCTAGGGGCCCTTCTTCCTTCAATGCGTGAACCACTTGAAGGTTCTACAAAACAAATAATGAAACTACGTGGTGCGACACTTTACAAAGAGGGCTCAAAGCCTAATGGTATCTGGCTTATTTCCAGTGGAGTGGTGAAGTGGACAAGTAAGAGCTTGAAAAGCAAGCACTCCTTGCACCCAACATTTTCACATGGGAGTACTTTGGGCCTATATGAACTGCTTACTGGAAAGTCACACATCTGTGACATGATCACAGATTCTGTGGTTCTCTGTTTCTTTATTGACATTGACAAGAGTCTTTCAATGCTAAGGTCAAACCATTCAGTAGAAGATTTCTTATGGAAGGAAAGTTCTCTTGTTCTTGTAAAGCTATTGCTTCCCCAAGTTTTTGAGAAAATATCAATGCAAGACCTGAGAGTTCTTGTTGGTGAAAGGTCACTAATGACCACACATGTTCCAGGAGAAACAATAGAAATTCCTCATCGTTCCATTGGATTTTTACTAGAAGGTTTCATTGAACCCCAGAATGTTCAAGAATTGATCACACCACCCACAACTTTACTTCCAGCACATGGGAATCTAAGCTTCCCTAACTTGGATATCTCAAGCTCAGGTATCGAGCAAGGCAGTTTTTATCATAGGGCAATATCGTATCTAGTTAAAGCAAGAGCAAGAGTAATCGTTTTTGATATAGCCGCATTTGAAGCTGACCGAGCTCTCCCGAGAAGACCATCCTCATTCATTTCACATTCAGGTGATCACCCCCATAGAACACCAAGCAGCGAGCATGTTAGTCTTATGAGTTGGCCTGAACAAGTCTTCAAGCCCAGGAAAAATAGTCGAAGTACTCAAGGAATGGACCTTCAACTACAAGCTAACAGCTTGTCTGCAAGGGCAATGCAACTTGGCATCTATGGCAGCTTGGTGGATGTTCGACAACATACAGAAAGCTTTCGTAAAAGCCCTGCTGAGCCATCCCTTAGCAAGTCACACCCGACAGTTCCTTCATACCATGGTCAGCAGCTTCTGTCCGTCAGATCAGAAGGGTCTACTACTATAAGGAAGGCAATTGCTGCAAGAAAGTCAACAGGAGATATCGTGTCAAGCTCAAGTCAAACTGCAGTTCGGAAACACGGTGACATAGTAGATGATTCCAGTGAAGGATCTGGTGATGAGGAGGAAATCATAATCAGAATCGATTCGCCCAGTAAGCTTACATTTCCCCACGTTCCTTGA 3450 42.93 MAEVTGLMLPYRLLEEDVSISDSSTSDPTDAVLFVGLCLVLGIASRQLLRGTRVPYTVALLIIGIALGSIEYGTHHQLGKIGDGIRLWASIDPDLLLAVFLPALLFESSFSMEVHQIKRCIVQMILLAGPGVLISTFCLGSLLKLTFPYDWSWKTSMLLGGLLSATDPVAVVALLKELGASKKLSTIIEGESLMNDGTAIVVYQLFYRMVLGSTFNWASILKFLAEVSLGAVGIGLAFGIASVLWLGFIFNDTVIEITLTLAVSYIAYYTAQEGVDVSGVLTVMTLGMFYAAVARTAFKGDGQKTLHHFWEMVAYIANTLIFILSGVVIAEGVLSSEDIFDHGTSWAYLVLLYVYAQVSRLLVVGTLFPFLRHFGYGLDWREATILSWSGLRGAVALSLSLSVKRTSDSSSYISSETGTLFVFLTGGIVFLTLIVNGSTTQFVLHLLHMDKLSAAKKRILEYTKYEMLNKALEAFGDLGDDEELGPTDWPTVKRYITCLNQVEGEAVHPHDAAESENSLNHMNLKDIRIRFLNGVQAAYWEMLDEGRITQTIANMLMQSVDQALDLVSHEPLGDWKGLKSNIHFPSYYKFLQTSIFPQKLATYFMVERLESACSICAAFLRAHRIARRQLHDFIGESDVASTIISESENEGEEARQFLEEVRVTFPQVLRVVKTRQVTYSVLNHLIEYVENLEKVGLLEEKEMLHLHDAVQTDLKKLLRNPPLVKVLKVRDLIEAHPLLGALLPSMREPLEGSTKQIMKLRGATLYKEGSKPNGIWLISSGVVKWTSKSLKSKHSLHPTFSHGSTLGLYELLTGKSHICDMITDSVVLCFFIDIDKSLSMLRSNHSVEDFLWKESSLVLVKLLLPQVFEKISMQDLRVLVGERSLMTTHVPGETIEIPHRSIGFLLEGFIEPQNVQELITPPTTLLPAHGNLSFPNLDISSSGIEQGSFYHRAISYLVKARARVIVFDIAAFEADRALPRRPSSFISHSGDHPHRTPSSEHVSLMSWPEQVFKPRKNSRSTQGMDLQLQANSLSARAMQLGIYGSLVDVRQHTESFRKSPAEPSLSKSHPTVPSYHGQQLLSVRSEGSTTIRKAIAARKSTGDIVSSSSQTAVRKHGDIVDDSSEGSGDEEEIIIRIDSPSKLTFPHVP 1149
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1605687 1618091 + Conep09aG0037100.1 Cone9ag0364 444527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0364 1149 SUPERFAMILY cAMP-binding domain-like 726 852 IPR018490 -
Cone9ag0364 1149 MobiDBLite consensus disorder prediction 1058 1075 - -
Cone9ag0364 1149 PANTHER SODIUM/HYDROGEN EXCHANGER 29 770 IPR018422 GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0009941(PANTHER)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro)
Cone9ag0364 1149 Gene3D - 152 204 - -
Cone9ag0364 1149 MobiDBLite consensus disorder prediction 1115 1135 - -
Cone9ag0364 1149 Pfam Cyclic nucleotide-binding domain 761 843 IPR000595 -
Cone9ag0364 1149 MobiDBLite consensus disorder prediction 1107 1135 - -
Cone9ag0364 1149 Pfam Sodium/hydrogen exchanger family 43 444 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cone9ag0364 1149 Gene3D Jelly Rolls 728 862 IPR014710 -
Cone9ag0364 1149 ProSiteProfiles cAMP/cGMP binding motif profile. 738 833 IPR000595 -
Cone9ag0364 1149 MobiDBLite consensus disorder prediction 983 1003 - -
Cone9ag0364 1149 MobiDBLite consensus disorder prediction 1054 1075 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0364 K14726 - mdm:139192638 1632.85