Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone9ag0373 | ATGGATATTGTTGTGGATAGGGTCGTGTACAGGCGGTACTCAAATTCAATGACTATTTTTGCGAATTTGTTCGGGATCACGGCTTGCGTTCTCATGCTAATCTGGTTGCTGCATTATCGTGGCGGCATTCATTATGATTCCAAATTTCCAGAGCATGTCTTCAACTGTCACCCTTTCTTCATGTTCATCGGTTTCATTTTCCTTTCGGGTCAAGCCATGATGTCATACAAGACGGTCAAAGCAGAGAAGAATGTGCAGAAGTTGATCCACATGCTACTGAATTTGACTGCTTTGTGTATGGGAATTGTTGGAATATGTGCTGTTTTTAAGTTTCATGATATGGCTGGGAACTTAAAGGACATGTATAGCTTCCATTCATGGATTGGGTTGTCCACTTTCATCTTGTTTGGCTTGCAGTGGGTGTTTGGGCTGTGCACATTTCTGTTTCCGGGAGCGCCGGTAGAGGTAAGGGCTAGATTGAAACCATGGCACATAGCTGGGGGAAGAGCACTTCTGTTCATGTCGATATGTACCGCTCTAACCGGGTTGATGGAGAAGGCTACTTTCCTCACACTTAAGGATCAACCCGAGGGACGCCTGGTCAGCTTCACCGGTCTTGCAATTCTCCTTTTCGGCATATTTGTTGATTTTTCTATCTTTCTTGGCCGCTATGCCTAA | 678 | 44.84 | MDIVVDRVVYRRYSNSMTIFANLFGITACVLMLIWLLHYRGGIHYDSKFPEHVFNCHPFFMFIGFIFLSGQAMMSYKTVKAEKNVQKLIHMLLNLTALCMGIVGICAVFKFHDMAGNLKDMYSFHSWIGLSTFILFGLQWVFGLCTFLFPGAPVEVRARLKPWHIAGGRALLFMSICTALTGLMEKATFLTLKDQPEGRLVSFTGLAILLFGIFVDFSIFLGRYA | 225 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 1672791 | 1674047 | - | Conep09aG0038100.1 | Cone9ag0373 | 444536 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone9ag0373 | 225 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 29 | - | - | |
| Cone9ag0373 | 225 | Pfam | Eukaryotic cytochrome b561 | 57 | 189 | IPR006593 | - | |
| Cone9ag0373 | 225 | Gene3D | - | 11 | 222 | - | - | |
| Cone9ag0373 | 225 | CDD | Cyt_b561_ACYB-1_like | 50 | 190 | - | - | |
| Cone9ag0373 | 225 | SMART | 561_7 | 56 | 183 | IPR006593 | - | |
| Cone9ag0373 | 225 | ProSiteProfiles | Cytochrome b561 domain profile. | 20 | 220 | IPR006593 | - | |
| Cone9ag0373 | 225 | FunFam | Cytochrome b reductase 1 | 12 | 224 | - | - | |
| Cone9ag0373 | 225 | PANTHER | CYTOCHROME B561-RELATED | 15 | 220 | IPR043205 | GO:0016491(InterPro)|GO:0016491(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone13ag0724 | Cone-Chr13:6993565 | Cone9ag0373 | Cone-Chr9:1672791 | 4.21E-51 | wgd | |
| Cone6ag0339 | Cone-Chr6:1606728 | Cone9ag0373 | Cone-Chr9:1672791 | 3.24E-145 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone9ag0373 | K08360 | - | cit:102616642 | 301.597 |