Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone9ag0385 | ATGTCGTCAAGGTCGTATTCTAATCTATTGGAGCTTGCTTCTGGGGAATCTCCATCGTTTGGCCGAATGAGCAGGCAAATCCCTCGAATCATGACAGTGGCCGGATTAATATCCGATATAGATGATGACCGATCGGAAGGCTTTTGCTCTGACCACTCTTCCTCTGTTCAGAGGGACAGAATCATAATAGTGGCCAATGAGCTCCCCATACGGGCTCAGAGAAAACCCGAAACGAGAGATTGGAGCTTTAGCTTGGATGAGAACTCTCTTCCCCTCCAGCTAAAAGATGGCATAGGAGATGATGACGTGGATGTAGTGTATGTGGGTTGTCTTAAGGCAGAAGTTCACCCTAGTGAGCAAGATGAGGTTTCAAAAATCCTCTTACAGTCCTTTAGATGTGTCCCTACATTTCTCCCACCTGAGCTTTATAGCAGGTACTACCACGGCTTCTGCAAGCAACAGCTTTGGCCTCTGTTCCACTACATGTTGCCTTTATCACCTGACCTTGGCGGTAGGTTTAATCGGTCTCTATGGCAAGCTTATGTATCAGTCAACAAGATTTTTGCAGATCGAATCATGGAAGTCATTAACCCAGAAGATGACTTTGTTTGGATACATGATTATCATCTCATGGTTTTACCCACCTTCTTGAGGAAAAGATTCAATCGGGTCAAGCTCGGGTTTTTCCTTCATAGCCCGTTCCCTTCGTCTGAAATTTATAAGACCCTGCCTATTAGGGAAGAGCTTCTACGTGCCCTTTTGAATTCGGATTTGATCGGGTTTCATACATTCGACTATGCCCGACATTTCTTATCATGCTGTAGTAGAATGCTTGGCTTGACATATGAATCAAAACGGGGTTATATAGGCATAGAGTATTATGGTCGAACTGTAAGCATCAAAATCCTACCAGTAGGTATCCATATGGGTCAGCTTGAGTCTGTTTTGAGCCTTGCAGAAACCAAAACAAAAGTTTCCGAGCTGGTCAAACAGTTTTCTGACAAAGGAAGGATAATGTTACTAGGAGTAGACGATATGGACATCTTCAAGGGGATAAGTCTAAAGCTTTTAGCCATGGAGCAGCTTCTTCAACAAAACCCAAAATTCCAAGGAAAAGTCGTCTTGGTACAAATTGCGAATCCGGCTAGAGGCAGGGGTAAAGACGTAAAAGAAGTCCAAGATGAGACAAATTCAACAGTCAAACGGATAAATGATACATTCGGAACACCCGGATATGACCCTGTTGTCTTAATTGAACAACCACTTCAATTTTACGAGAGAATTGCTTACTACGTTGTTGCAGAGTGTTGTCTTGTCACTGCTGTAAGAGATGGAATGAATTTGATTCCATATGAGTATATAATTTCTAGACATGGAAACGAGATGCTGGATGAGGTTTTAGGGCTCGACTATAATTCAAAGAAGAGCATGTTAGTTGTGTCCGAGTTTATAGGCTGCTCCCCGTCTTTAAGTGGAGCCATCCGCGTCAACCCATGGAACATTGAGGCCGTATCAGATGCAATGTACTCTGCTTTAGAGATGCCTTCTTCAGAAAAACAACTCAGGCATGAGAAACATTATAGATATGTAAGCACACATGATGTTGGGTACTGGGCCCGTAGTTTCTTACAAGATTTGGAGCGGACTTGTAAGGACCACGTAAGGAGGAGGTGTTGGGGAATTGGGTTCGGTTTGGGTTTTAGAGTTGTAGCGCTGGATCCAAACTTTAGGAAGCTTTCAATGGAGCATATTGTTTCTGCATATAAGAGGACAAGTACAAGGGCAATCCTTTTGGACTATGATGGGACTCTTATCCCTCCAGGCTCAATTGATAAGAGCCCTAGTTCGAGATGTATTGAGATCCTTAACAGCCTCTGTCAGGATAAGAACAATGTGGTTTTTATTGTTAGTGCGAGAAGCCGTAAAACATTATCTGAATGGTTCTCTCCTTGTGAGAAGCTCGGGATTGCTGCAGAGCATGGCTACTTTCTAAGGTTGAAAAGAGATGCAGAATGGGAAACGTGCGTGGGCCCCACAGACTGTAGCTGGAAGCAGATTGCAGAGCCAGTTATGAAACTATACACGGAAACGACTGATGGGTCCACCATTGAAGATAAGGAAACAGGGGTCGTGTGGTGTTATGAAGATGCTGATCGGGATTTTGGCTCGTGTCAAGCGAAGGAGCTTCATGACCATCTTGAAAGTGTGCTTGCTAATGAACCTGTTACTGTCAAGCGTGGTTGGAATATTGTAGAAGTTGTGCCACAGGGTGTAAGTAAGGGGCTTGTGGCAAAAAGGCTACTTTCAATTATGGAAGAGCGAGGTATGTCTCCAGATTATGTTCTGTGCATAGGGGATGATAGATCGGACGAGGACATGTTTGAGGTGATTAATAGTGCAATGGCGGGGGAAACGTCCAGTCTTCCTACAGCGGAAGTTTTTGCATGTACTGTTGGGAAAAAGCCAAGTAAGGCGAAGTATTATTTAGATGATGTTGCGGAGATTTTCCGGTTGATACAGGGATTGGCCTCTGTTTCGGAACAGGTAGTTTCTTCTCGAGGATGA | 2565 | 43.94 | MSSRSYSNLLELASGESPSFGRMSRQIPRIMTVAGLISDIDDDRSEGFCSDHSSSVQRDRIIIVANELPIRAQRKPETRDWSFSLDENSLPLQLKDGIGDDDVDVVYVGCLKAEVHPSEQDEVSKILLQSFRCVPTFLPPELYSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGIEYYGRTVSIKILPVGIHMGQLESVLSLAETKTKVSELVKQFSDKGRIMLLGVDDMDIFKGISLKLLAMEQLLQQNPKFQGKVVLVQIANPARGRGKDVKEVQDETNSTVKRINDTFGTPGYDPVVLIEQPLQFYERIAYYVVAECCLVTAVRDGMNLIPYEYIISRHGNEMLDEVLGLDYNSKKSMLVVSEFIGCSPSLSGAIRVNPWNIEAVSDAMYSALEMPSSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCKDHVRRRCWGIGFGLGFRVVALDPNFRKLSMEHIVSAYKRTSTRAILLDYDGTLIPPGSIDKSPSSRCIEILNSLCQDKNNVVFIVSARSRKTLSEWFSPCEKLGIAAEHGYFLRLKRDAEWETCVGPTDCSWKQIAEPVMKLYTETTDGSTIEDKETGVVWCYEDADRDFGSCQAKELHDHLESVLANEPVTVKRGWNIVEVVPQGVSKGLVAKRLLSIMEERGMSPDYVLCIGDDRSDEDMFEVINSAMAGETSSLPTAEVFACTVGKKPSKAKYYLDDVAEIFRLIQGLASVSEQVVSSRG | 854 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1756657 | 1760212 | + | Conep09aG0039500.1 | Cone9ag0385 | 444548 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone9ag0385 | 854 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 593 | 710 | - | - | |
Cone9ag0385 | 854 | Pfam | Glycosyltransferase family 20 | 60 | 547 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Cone9ag0385 | 854 | Gene3D | - | 593 | 728 | IPR023214 | - | |
Cone9ag0385 | 854 | Gene3D | - | 729 | 853 | IPR023214 | - | |
Cone9ag0385 | 854 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 315 | 531 | - | - | |
Cone9ag0385 | 854 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 59 | 551 | - | - | |
Cone9ag0385 | 854 | Pfam | Trehalose-phosphatase | 597 | 832 | IPR003337 | GO:0005992(InterPro) | |
Cone9ag0385 | 854 | CDD | HAD_TPP | 595 | 832 | - | - | |
Cone9ag0385 | 854 | FunFam | Trehalose-6-phosphate synthase 10 | 724 | 853 | - | - | |
Cone9ag0385 | 854 | Gene3D | Glycogen Phosphorylase B; | 51 | 313 | - | - | |
Cone9ag0385 | 854 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 24 | 845 | IPR001830 | GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER) | |
Cone9ag0385 | 854 | NCBIfam | HAD-IIB family hydrolase | 596 | 800 | IPR006379 | - | |
Cone9ag0385 | 854 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 53 | 313 | - | - | |
Cone9ag0385 | 854 | CDD | GT20_TPS | 60 | 547 | IPR001830 | GO:0003824(InterPro)|GO:0005992(InterPro) | |
Cone9ag0385 | 854 | SUPERFAMILY | HAD-like | 594 | 842 | IPR036412 | - | |
Cone9ag0385 | 854 | Gene3D | Glycogen Phosphorylase B; | 314 | 531 | - | - | |
Cone9ag0385 | 854 | NCBIfam | trehalose-phosphatase | 594 | 842 | IPR003337 | GO:0005992(InterPro) | |
Cone9ag0385 | 854 | FunFam | Trehalose-6-phosphate synthase 2 | 678 | 756 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone19ag1019 | Cone-Chr19:7611801 | Cone9ag0385 | Cone-Chr9:1756657 | 0 | dispersed | |
Cone9ag0238 | Cone-Chr9:1015255 | Cone9ag0385 | Cone-Chr9:1756657 | 2.09E-133 | dispersed | |
Cone8ag0594 | Cone-Chr8:5022593 | Cone9ag0385 | Cone-Chr9:1756657 | 0 | transposed | |
Cone6ag0352 | Cone-Chr6:1717486 | Cone9ag0385 | Cone-Chr9:1756657 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone9ag0385 | K16055 | - | vvi:100252552 | 1453.34 |