Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0393 ATGACTCTGTCTGCTACCTTCATCAACGCCTTCAAATCCACAGCGCACATCTCATGGAAATCTACCGGTAGGCTTCAGCAAACCATTGCGGGATGCGTAGAGCGTCAAGGTACGACTCTTCATTCCGGAAACGTTTCGAAGGTGAGATTGTGGCCGGAGGTTGCAGCCAGAGGAAGGCATTTTGATTTTCGTTCCAATTTGATTCCCGCTTCGATCAATTACGTACAGCAGTCGTCCCTGTGTACTACGCTCTGTAAGGATGGGGTTCGGATTCGAACAGTTGAGCATTTGCTTTCTGCTTTGGAGGCTACAGGCGTTGATAATTGCAGGATCGAGATAGCTGATGAGGACTCTGAAGATGGTGAAATTGAGGTTCCTATTCTTGATGGGTCGGTAAGTGAGTGGGTAGAGGCAATAAAAGAAGTTGGTCTAAAGGTGGCCATTTATCAGTGCATTTGTGGAAGAATGATTCTTTTGTGGCTGCATTCCCTGCATCAGCTGTTCAAATTACCTATGGAATTGACTATCCACAGGGGAGATAGCTTCATCAAGAACCTTTTGCATATACAAGGAGGTGGAGCATATGCGCAACAAAGGACTTATCAAAGGGGGCTCACTAGAAAATGCGATAGTTTGTAG 639 46.01 MTLSATFINAFKSTAHISWKSTGRLQQTIAGCVERQGTTLHSGNVSKVRLWPEVAARGRHFDFRSNLIPASINYVQQSSLCTTLCKDGVRIRTVEHLLSALEATGVDNCRIEIADEDSEDGEIEVPILDGSVSEWVEAIKEVGLKVAIYQCICGRMILLWLHSLHQLFKLPMELTIHRGDSFIKNLLHIQGGGAYAQQRTYQRGLTRKCDSL 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1807930 1811569 - Conep09aG0040300.1 Cone9ag0393 444556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0393 212 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 26 145 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Cone9ag0393 212 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 1 184 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Cone9ag0393 212 SUPERFAMILY Ribosomal protein S5 domain 2-like 25 145 IPR020568 -
Cone9ag0393 212 Gene3D lpxc deacetylase, domain 1 24 149 IPR015870 GO:0008759(InterPro)|GO:0009245(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0362 Cone-Chr6:1772232 Cone9ag0393 Cone-Chr9:1807930 9.88E-96 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0393 K02535 - vvi:100266270 216.853