Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0413 ATGAGGAGTCTGTTCACGAATCTTGTTCATATTCTAATCAAACCCTACAAACTCTGTTCTAAGAGAGAAGGAAAGAATGATGAGGTTGATCTGAATCAAATTGCCCAACAGGAACAGAAGCTCTTTCTCTACGAAACCTTAGTCGCAGCTACTAACAATTTCCACCCGACACAAAAGCTCGGCGAAGGCGGCTTCGGACCAGTTTACAGGGGGAAATTGGATGATGGAAGAGAGATTGCAGTGAAGAAGCTATCATATAGTTCAAATCAAGGCAAGAGAGAGTTCTTAAACGAGGTCAAGTTGTTGGCGCGAGTACAACATCGGAATGTGGTTCATTTATTAGGATGTTGTGTCAATGGCCGAGACAAGCTATTGGTCTATGAGTACATCTCGAACCAAAGCCTCGACAAGCTTCTCTTCAAATCTAATAGTAGGAGAGAGGAGGTTGGGTGGACAGAGAGGTATGAGATCATTAAGGGTGTGGCAAAGGGTTTGCTTTACCTCCATGAAGATGCACATGACACTATAATCCATCGAGACATTAAGGCCAGTAATATACTGGTTGATGACGATTGGGAACCGAAGATTGCTGATTTTGGACTAGCCCGTCTCTTCCCCGAAGACGATCAACAACTTGTCCATACCCGAATAGCAGGCACAAATGGGTATATGGCTCCAGAGTATGTGTTGTACGGACATTTATCAGTGAAGGCGGACGTCTATAGTTTCGGAGTTTTGGTTCTGGAGCTCATCACCGGAAAAAGAATCTCTAGTTTTAAACCCCCCGATAATAATGTTGATGCAAACAGTCTACTTGATTGGGCATACAAGCTTTACGAGGAAGGAAGGAGTATAGAGATTGTGGATCCAACAATACTAGAAGCTGCACCGTCGGAACAACAAGTAGTAATGTGCATTCAAATAGGGCTGCTTTGCACACAGGGAGATCCACAGCTACGACCGACAATGCAACGTGTCGTCGTGATGCTGTCCAAAAAACCTGGTAATGACTTGGCACAAGTACCGGGTTGCCCAGGAGTGGCTGGACCTAGATATAGGAGAAGATCTGGTCAACCTAGTAGTCCACTACTATATTCCTCGGTTCCCGGAACTTCTTCCGGTTCAGGTTCTAGTAACAAAACTACGGCAACTACTGCAACTACTGCAACAACTACTTCAGTTAGCTCCGGCTTAGACATTCGTGGAAAACACCCTATACAAGATTAA 1227 44.58 MRSLFTNLVHILIKPYKLCSKREGKNDEVDLNQIAQQEQKLFLYETLVAATNNFHPTQKLGEGGFGPVYRGKLDDGREIAVKKLSYSSNQGKREFLNEVKLLARVQHRNVVHLLGCCVNGRDKLLVYEYISNQSLDKLLFKSNSRREEVGWTERYEIIKGVAKGLLYLHEDAHDTIIHRDIKASNILVDDDWEPKIADFGLARLFPEDDQQLVHTRIAGTNGYMAPEYVLYGHLSVKADVYSFGVLVLELITGKRISSFKPPDNNVDANSLLDWAYKLYEEGRSIEIVDPTILEAAPSEQQVVMCIQIGLLCTQGDPQLRPTMQRVVVMLSKKPGNDLAQVPGCPGVAGPRYRRRSGQPSSPLLYSSVPGTSSGSGSSNKTTATTATTATTTSVSSGLDIRGKHPIQD 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1912445 1914378 - Conep09aG0042300.1 Cone9ag0413 444576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0413 408 FunFam Cysteine-rich receptor-like protein kinase 10 18 129 - -
Cone9ag0413 408 FunFam Cysteine-rich receptor-like protein kinase 2 130 338 - -
Cone9ag0413 408 Pfam Protein kinase domain 55 326 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag0413 408 MobiDBLite consensus disorder prediction 359 398 - -
Cone9ag0413 408 ProSiteProfiles Protein kinase domain profile. 54 339 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag0413 408 SMART serkin_6 54 330 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag0413 408 Gene3D Phosphorylase Kinase; domain 1 17 129 - -
Cone9ag0413 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone9ag0413 408 SUPERFAMILY Protein kinase-like (PK-like) 35 330 IPR011009 -
Cone9ag0413 408 CDD STKc_IRAK 60 332 - -
Cone9ag0413 408 Gene3D Transferase(Phosphotransferase) domain 1 130 339 - -
Cone9ag0413 408 MobiDBLite consensus disorder prediction 339 408 - -
Cone9ag0413 408 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 26 366 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone9ag0413 Cone-Chr9:1912445 Cone9ag1062 Cone-Chr9:5835150 4.55E-96 dispersed
Cone13ag0744 Cone-Chr13:7090410 Cone9ag0413 Cone-Chr9:1912445 1.26E-155 wgd
Cone19ag0750 Cone-Chr19:6126358 Cone9ag0413 Cone-Chr9:1912445 4.34E-153 wgd
Cone6ag0386 Cone-Chr6:1878713 Cone9ag0413 Cone-Chr9:1912445 1.35E-234 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83166 PF16113 ECH_2 1.20E-101 CL0127 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0413 - - - 0.0