Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0448 ATGGTAGATAGAGATTCCAATTCGAGTAGCGGCGGCCAACCTTCTCGTAATAATGGCTGTGCCAGAGCTCCAAGTGTTTTAGATACTATCTGTCACGCCGGTGCTGGTGCTTCCGCAGGTGCTATTGCGGCTACGTTTGTGTGTCCGTTGGATGTGATCAAGACGAGGCTGCAAGTGCATGGTCTTCCTTCTGGTCATAAAGGTAGTGTCATTATCCCAAGCTTACAGAATATAATACGTACTGAAGGTTTGAGGGGGCTCTATCGTGGGCTTTCGCCAACACTAGTAGCGCTTCTTCCTAACTGGGCTGTGTACTTCACAGTTTATGAGCATCTAAAAGGCCTACTCCGTTCAGATGGGGATCGTGAAGGGTCAATTGGCAAAAATATGGTCGCTGCTGCAGGTGCAGGGGCTTCCACTTCTATTGCAACAAATCCATTATGGGTTGTTAAGACCAGACTTCAAACACAGGGAATGAGGCCTGGTGTGATTCCTTACTCAGGAATGCTTTCAGCCTTCTCAAGGATCATACACGAAGAAGGAATACGAGGCCTTTACAGTGGCATAATCCCTTCACTGGCCGGAATAAGTCATGTTGCTATTCAGTTTCCTGCATACGAATGGCTCAAGTCTTACATGGCAAAAAGAGATAATACAACTGTTAATAAGCTAAGTCCTGGCAGAGTAGCTGTTGCCTCCTCCCTCTCTAAAATAATCGCATCTGTAATGACTTACCCCCATGAGGTGATTCGTTCTAGACTTCAAGAACAAGGACAGGCTAGGGATATTCCAGTTCAATATACGGGTGTTGTAGATTGTGTCAAGAAGGTGTTCCACAAAGAAGGCTTTGCAGGTTTCTACAGGGGCTGTGCAACAAATCTAATGCGGACAACTCCTTCTGCCGTAATAACTTTTACCAGTTACGAGATGATATATAGGTATATGCAAAAGGTTCTTCCTCCAGACAAGAACCATTCACAATCCTCCCAACCTAGATCTAGCGGCCATGTCAAACCGGAACAAGAAAATGAAGGCAGTTTAAGTAAAAATGATGGTTCTGGTTTACAGCAATCACAATCTCAGTCAAATAAGAGCACCCAAGTTCCTTTGGGAAGCAAAGACCACCTGGCTGCAAGACACTGA 1143 45.32 MVDRDSNSSSGGQPSRNNGCARAPSVLDTICHAGAGASAGAIAATFVCPLDVIKTRLQVHGLPSGHKGSVIIPSLQNIIRTEGLRGLYRGLSPTLVALLPNWAVYFTVYEHLKGLLRSDGDREGSIGKNMVAAAGAGASTSIATNPLWVVKTRLQTQGMRPGVIPYSGMLSAFSRIIHEEGIRGLYSGIIPSLAGISHVAIQFPAYEWLKSYMAKRDNTTVNKLSPGRVAVASSLSKIIASVMTYPHEVIRSRLQEQGQARDIPVQYTGVVDCVKKVFHKEGFAGFYRGCATNLMRTTPSAVITFTSYEMIYRYMQKVLPPDKNHSQSSQPRSSGHVKPEQENEGSLSKNDGSGLQQSQSQSNKSTQVPLGSKDHLAARH 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2078838 2082627 - Conep09aG0045800.1 Cone9ag0448 444611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0448 380 MobiDBLite consensus disorder prediction 320 380 - -
Cone9ag0448 380 Pfam Mitochondrial carrier protein 125 215 IPR018108 -
Cone9ag0448 380 Pfam Mitochondrial carrier protein 224 317 IPR018108 -
Cone9ag0448 380 Pfam Mitochondrial carrier protein 29 118 IPR018108 -
Cone9ag0448 380 MobiDBLite consensus disorder prediction 346 370 - -
Cone9ag0448 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 115 IPR018108 -
Cone9ag0448 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 212 IPR018108 -
Cone9ag0448 380 Gene3D Mitochondrial carrier domain 25 315 IPR023395 -
Cone9ag0448 380 MobiDBLite consensus disorder prediction 1 20 - -
Cone9ag0448 380 MobiDBLite consensus disorder prediction 321 336 - -
Cone9ag0448 380 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 28 315 - -
Cone9ag0448 380 SUPERFAMILY Mitochondrial carrier 26 310 IPR023395 -
Cone9ag0448 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 314 IPR018108 -
Cone9ag0448 380 PRINTS Mitochondrial carrier protein signature 139 157 IPR002067 GO:0055085(InterPro)
Cone9ag0448 380 PRINTS Mitochondrial carrier protein signature 90 110 IPR002067 GO:0055085(InterPro)
Cone9ag0448 380 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085(InterPro)
Cone9ag0448 380 PRINTS Mitochondrial carrier protein signature 45 59 IPR002067 GO:0055085(InterPro)
Cone9ag0448 380 PRINTS Mitochondrial carrier protein signature 32 45 IPR002067 GO:0055085(InterPro)
Cone9ag0448 380 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 27 327 IPR044712 GO:0006862(InterPro)|GO:0022857(PANTHER)|GO:0035352(PANTHER)|GO:0051724(PANTHER)|GO:0055085(PANTHER)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0781 Cone-Chr12:7136414 Cone9ag0448 Cone-Chr9:2078838 1.66E-56 dispersed
Cone8ag0303 Cone-Chr8:1751422 Cone9ag0448 Cone-Chr9:2078838 1.67E-12 dispersed
Cone9ag0448 Cone-Chr9:2078838 Cone9ag1451 Cone-Chr9:10774072 6.92E-07 dispersed
Cone6ag0430 Cone-Chr6:2086342 Cone9ag0448 Cone-Chr9:2078838 3.15E-255 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0448 K15115 - csv:101216902 503.442