Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone9ag0499 | ATGGCAACCATATCACCATCAGCAAATTCACCACCTTCTAACTCTTCTTCAGAGCAACCCACAACTTCACCACCGTCCAATTCCAACCGACCACCACCACCACCAGAACCATCCACCTCTGCTCCACCACCTTCGAATCCCAACCCACCACCACCACCACTGTCAACGTCTCATCCACCACCCCAACCTCCTTCAGATTCTCCAACAACTACTTCTCCACCTTCTCAGTCAACAGATCCACCTCCCCCCACCCCCACCACCCCATCAACCATATCTTCACCGCCACCTCCTCCTCCTTCTTCCGCTCCACCACCATTGGCATCACCGAACATATCACCTCCACCTCCGCCCGATTCCGTCTCACCTTCTCCCCCTCCACCACCTTCTTCCACCGCTACCCCACTTCCTCCTTCTTCAACCTCTAATCCTCCTCCACCACCACCACCACCACCACCACCATCAAATCCACCCGAGACTTCACCACCACCACCATCAAATCCCCCCGAGATTTCACTATCACCTCCACCACAATCAAAGCCTCCTGAGAATTCACCACCACCACCACCATCTCCACAATCAAAGCCTCCCGATAGTTCACCACCACCGCCTCCTCCATCAGGTCCACCTGAGAGTTCACCTCGACCACCACTGCAATCAGAGCCTCCCGAGACTTCACCACCACCACTGCCCCAATCATCAAAACCTCCCGAAACTTCATCATCATCACCACCACCACCACCTCCCGACGCTAGAGCACCTGGGAATTCAACCCCACCACCTGAAAAACCACCTTCACCACCTCAATCAAACCCTCCAAAAAATTCACCTTCTCCCCCACAACCAGCATCAGAACCTCCGACCAGCAGTGCGCCTCCCCCTTCTAAGCTCACTCCCATTTCACCTTCAATCTCAACCTCAAAGGCTCCTCCCCCACCACCTCCATTGTCCTCTCAATCAAACAATGGAACTAGAAATACTTCCACTCCTACTGCACCAGAAACATCCAACCCCACATCTAATAATACTAATGGAGGAGGAGGAGGAGGAGGAGGAGGTATTGGTCTTGGAGGCATGGTTGCTATTGCTGTCGTGTCTGGAATGATACTGCTCGGCCTTTTCGGATTGGCCGCTTGGTGTATTAGAAAGCAAAAGAAAAGGCCCGGAGTTGGTGTTTACGTAATGCCATCCCCTCTTGGCTCCTCACCTAGATCAGATTCATACCTTATAAAGGTGAATTCCTCAGCCCCAATAGGAAGTGAATCTGCCCGCGAATTTTCAGTTTCTCCCCCTGATCCTTCTACATTAGGTCATTCAAGGTCGTTGTTTACATATGAAGAACTAGCTAAGGCAACGGACGGGTTTTCGGCTCAGAATCTATTAGGTGAAGGTGGGTTTGGTTCGGTATATAAAGGATTTCTACCTGATGAGAGAGAAGTGGCAGTGAAGGAACTGAAAATCGGAGGAGGTCAGGGCGAGAGAGAATTCAAAGCTGAAGTTGAGACTATTAGCCGGATACATCATCGCCATTTGGTTTCATTAGTTGGTTATTGCATATCGGAGAATAGGAGGCTTCTTGTCTATGACTATGTCCCTAACAATAATCTTTATTATCATATTCACGAGGAGGGTAAGCCAGCTCTTGATTGGGCAAAACGGGTAAAAATTGCATCTGGCGCTGCTCGGGGCATAGCTTATCTACATGAAGATTGCAATCCTCAAATTATTCACAGGGATATCAAATCATCAAACATTCTTTTGAACAACAATTTTGAAGCTCTGGTTTCAGATTTTGGGCTTGCAAAATTAGCTCTGGGTGCTAATACACATATAACTACACGGGTTATGGGTACATTCGGATATGTGGCTCCTGAGTATGCTTCAAGTGGGAAATTGACTGAGAAATCAGATGTCTACTCTTTTGGAGTTGTACTTCTAGAGCTAATTACCGGACGGAAGCCAGTAGATAGATCTCAGCCTGTAGGAGATGAAAGTCTAGTTGAATGGGCTCGACCATTGCTTAGTCATGCACTTGAAACCAAGCAATTTCAAGAATTGGCAGATCCAAGACTCGAGAGAAACTATGCCGAGACGGAAATGTTCAAAATGATCGAGATTGCCGCTGCTTGTGTGAGGCATTCAGCCGCTAAGAGGCCTCGAATGGGACAGGTTGTTAGAGCTTTTGACAGTTTTGATACGTTGGATCTTACAAACAGATTGGCAGTAGGGGAAAGTAAGACCTTCGATACAGCAGAGCAATCTGCCGAGATTAGGCTTTTCCGGAGAATGGCTTTCGGTAGCCAACCTTATAGTACAGATTACTTTAGCCAAGATTATAGTACAGCTTAA | 2346 | 48.17 | MATISPSANSPPSNSSSEQPTTSPPSNSNRPPPPPEPSTSAPPPSNPNPPPPPLSTSHPPPQPPSDSPTTTSPPSQSTDPPPPTPTTPSTISSPPPPPPSSAPPPLASPNISPPPPPDSVSPSPPPPPSSTATPLPPSSTSNPPPPPPPPPPPSNPPETSPPPPSNPPEISLSPPPQSKPPENSPPPPPSPQSKPPDSSPPPPPPSGPPESSPRPPLQSEPPETSPPPLPQSSKPPETSSSSPPPPPPDARAPGNSTPPPEKPPSPPQSNPPKNSPSPPQPASEPPTSSAPPPSKLTPISPSISTSKAPPPPPPLSSQSNNGTRNTSTPTAPETSNPTSNNTNGGGGGGGGGIGLGGMVAIAVVSGMILLGLFGLAAWCIRKQKKRPGVGVYVMPSPLGSSPRSDSYLIKVNSSAPIGSESAREFSVSPPDPSTLGHSRSLFTYEELAKATDGFSAQNLLGEGGFGSVYKGFLPDEREVAVKELKIGGGQGEREFKAEVETISRIHHRHLVSLVGYCISENRRLLVYDYVPNNNLYYHIHEEGKPALDWAKRVKIASGAARGIAYLHEDCNPQIIHRDIKSSNILLNNNFEALVSDFGLAKLALGANTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDRSQPVGDESLVEWARPLLSHALETKQFQELADPRLERNYAETEMFKMIEIAAACVRHSAAKRPRMGQVVRAFDSFDTLDLTNRLAVGESKTFDTAEQSAEIRLFRRMAFGSQPYSTDYFSQDYSTA | 781 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2387964 | 2391727 | - | Conep09aG0050900.1 | Cone9ag0499 | 444662 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone9ag0499 | 781 | Gene3D | Phosphorylase Kinase; domain 1 | 422 | 529 | - | - | |
Cone9ag0499 | 781 | SUPERFAMILY | Protein kinase-like (PK-like) | 430 | 725 | IPR011009 | - | |
Cone9ag0499 | 781 | SMART | serkin_6 | 454 | 730 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone9ag0499 | 781 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Cone9ag0499 | 781 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 314 | 762 | IPR047117 | - | |
Cone9ag0499 | 781 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 574 | 586 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone9ag0499 | 781 | Pfam | Protein tyrosine and serine/threonine kinase | 457 | 726 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone9ag0499 | 781 | FunFam | proline-rich receptor-like protein kinase PERK8 | 530 | 741 | - | - | |
Cone9ag0499 | 781 | ProSiteProfiles | Protein kinase domain profile. | 454 | 731 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone9ag0499 | 781 | MobiDBLite | consensus disorder prediction | 1 | 347 | - | - | |
Cone9ag0499 | 781 | MobiDBLite | consensus disorder prediction | 25 | 317 | - | - | |
Cone9ag0499 | 781 | CDD | STKc_IRAK | 460 | 725 | - | - | |
Cone9ag0499 | 781 | ProSitePatterns | Protein kinases ATP-binding region signature. | 460 | 482 | IPR017441 | GO:0005524(InterPro) | |
Cone9ag0499 | 781 | FunFam | Proline-rich receptor-like protein kinase PERK8 | 426 | 529 | - | - | |
Cone9ag0499 | 781 | Gene3D | Transferase(Phosphotransferase) domain 1 | 530 | 743 | - | - | |
Cone9ag0499 | 781 | MobiDBLite | consensus disorder prediction | 318 | 346 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone16ag0598 | Cone-Chr16:7757238 | Cone9ag0499 | Cone-Chr9:2387964 | 8.61E-181 | dispersed | |
Cone2ag0408 | Cone-Chr2:2164959 | Cone9ag0499 | Cone-Chr9:2387964 | 7.05E-180 | dispersed | |
Cone8ag0663 | Cone-Chr8:6652064 | Cone9ag0499 | Cone-Chr9:2387964 | 1.85E-157 | dispersed | |
Cone9ag0499 | Cone-Chr9:2387964 | Cone14ag0778 | Cone-Chr14:4523716 | 9.33E-91 | dispersed | |
Cone9ag0499 | Cone-Chr9:2387964 | Cone9ag0505 | Cone-Chr9:2417772 | 1.09E-74 | proximal | |
Cone12ag0577 | Cone-Chr12:4303219 | Cone9ag0499 | Cone-Chr9:2387964 | 2.84E-46 | transposed | |
Cone13ag0873 | Cone-Chr13:7771553 | Cone9ag0499 | Cone-Chr9:2387964 | 1.17E-207 | wgd | |
Cone19ag0878 | Cone-Chr19:6886699 | Cone9ag0499 | Cone-Chr9:2387964 | 1.09E-71 | wgd | |
Cone6ag0487 | Cone-Chr6:2421458 | Cone9ag0499 | Cone-Chr9:2387964 | 1.42E-290 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
83168 | PF14368 | LTP_2 | 6.40E-14 | CL0482 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone9ag0499 | - | - | - | 0.0 |