Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0526 ATGAGATCGATCGGGGTTAAACCATCCATTGACCATACTGCAATCGAGATGACCGGAACCGACCGACCTGGACTACTATCAGAACTGAGTGCTATCTTGACCCATCTCAATTGCAATGTTGTAAGCGCCGAGATCTGGACCCATAACACTCGGGCAGCTGCCGTTATGAACATAACAGATGAAAAAACGGGTCTTCCAATCACTGACACGGAGCGGCTCTCTAAGATCAAGGAATTGCTCTGCAATGTGCTCAAGGGAGGAAGCAATAACAATATCTCCAGTGAAGCTAAGACCGTGGTTTCTCATGGCGGGACCCACACGGAGAGAAGGCTTCATCAGATGATGTTTACTGATAGAGATTACGAACGGGCGGCCGAGGACGATGCCTTGGATGAGAACCAGAGACCCGAGGTAACTGTCGTGAATTGGCTCGACAAAGATTACTCTGTGGTTACTATCCGGAGCAAGGATAGGCCCAAGCTTCTATTCGATACGGTTTGTACCTTGACCGATATGCAATATATCGTGTTTCACGCAAATGTTAATGCAGAAGGATCTCGAGCTTATCAGGAATATTACATCAGGCATGTTGATGGATCTCCAGTGAAATCAGAGGCAGAAAGGGAAAGAGTAATCCAATGTCTTCAAGCTGCTATTGAGAGAAGAGTGTCTGAGGGGTTGAAGCTTGAATTGTGCACTTCCGATCGAATGGGGTTGCTGTCGGACGTTACTCGGATATTCCGAGAGAACAGCCTAACGGTTACAAGAGCTGAGGTGGCGACTAAAGCAGGCAAGGCGATAAATACGTTCTATGTTCAGGATGCGTCGGGATATCCGGTAGATTCCAAGACAATAGATTCCATCAGGCAAGAGATTGGTCAAACCATACTACAAGTGACGGGCAGTTCTCAAGAGTCGAAACCTGATTCTCAAGATTCTACGACCAGATTCCTCTTTGGAGGTCTCTTCAAGTGTAGATCATTTGTTAACTTTGGACTTATTAGATCCTATTCTTGA 1017 46.31 MRSIGVKPSIDHTAIEMTGTDRPGLLSELSAILTHLNCNVVSAEIWTHNTRAAAVMNITDEKTGLPITDTERLSKIKELLCNVLKGGSNNNISSEAKTVVSHGGTHTERRLHQMMFTDRDYERAAEDDALDENQRPEVTVVNWLDKDYSVVTIRSKDRPKLLFDTVCTLTDMQYIVFHANVNAEGSRAYQEYYIRHVDGSPVKSEAERERVIQCLQAAIERRVSEGLKLELCTSDRMGLLSDVTRIFRENSLTVTRAEVATKAGKAINTFYVQDASGYPVDSKTIDSIRQEIGQTILQVTGSSQESKPDSQDSTTRFLFGGLFKCRSFVNFGLIRSYS 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2511926 2513120 + Conep09aG0053600.1 Cone9ag0526 444689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0526 338 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 11 300 IPR040217 -
Cone9ag0526 338 SUPERFAMILY ACT-like 11 82 IPR045865 -
Cone9ag0526 338 CDD ACT_ACR_4 226 297 - -
Cone9ag0526 338 Pfam ACT domain 14 62 IPR002912 -
Cone9ag0526 338 ProSiteProfiles ACT domain profile. 14 94 IPR002912 -
Cone9ag0526 338 SUPERFAMILY ACT-like 224 293 IPR045865 -
Cone9ag0526 338 CDD ACT_ACR_2 13 86 - -
Cone9ag0526 338 CDD ACT_ACR_3 148 222 - -
Cone9ag0526 338 ProSiteProfiles ACT domain profile. 228 304 IPR002912 -
Cone9ag0526 338 Gene3D - 12 84 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone8ag0356 Cone-Chr8:2044701 Cone9ag0526 Cone-Chr9:2511926 1.40E-105 dispersed
Cone9ag0526 Cone-Chr9:2511926 Cone9ag0725 Cone-Chr9:3461579 4.68E-103 dispersed
Cone13ag0891 Cone-Chr13:7892887 Cone9ag0526 Cone-Chr9:2511926 3.15E-172 wgd
Cone19ag0890 Cone-Chr19:6964192 Cone9ag0526 Cone-Chr9:2511926 7.71E-168 wgd
Cone6ag0514 Cone-Chr6:2553284 Cone9ag0526 Cone-Chr9:2511926 6.52E-225 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0526 - - - 0.0