Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone9ag0534 | ATGACTTCAGCGATCGACTTTCTGTACCTTCAGTCCTCCATTATCAGTTTCGAAGCTCTTCTTTGTCTTCTCATTTTCACTGCGACTTTCGCTTACTTTCTCGCTCCGGGCGGGTTAGCGTGGGCGATATCCAAGTCCAAAACCCGATTCGCTATTCCTGGTCCGAGCGGTTTCCCGCTCGTCGGTTTACTCTGCGTCTTCAACGGTTCGAGGACTCCCCATCGGGTTTTAGCCAAGCTTGCTCGCACCTTCCACGCCCAGCGTTTAATGGCGTTTTCCGTCGGTCTAACACGGTTCGTCATTTCAAGCCATCCCGATACGGCGAAAGAAGTTCTTAACAGCTCGGCTTTTGCTGATAGACCGGTCAAGGAATCGGCGTACGAGCTTCTCTTCCACAGAGCCATGGGATTTGCTCCCTATGATGGGTATTGGAGAGAGTTGAGGAGGATCTCATCGACTCATCTTTTCAGCCCTAGACGAATAGCGACCTCTGAGGGCTTCCGACGTGAAATGGGTTTGAAAATGGTGGAAGAAATTAACTCTCGCATGGCCGACAATGGTAAGGTACATATTAAGAGGATACTTCATTTCGGTTCTCTTAACAACGTAATGAAGACCGTGTTCGGTAAATCTTATGAGTGTATCGAAGGCGGGGAATGGCTTGAGCTTGAGAAAATGGTGAGCGAAGGGTACGAGCTGCTTGGAATCTTCAACTGGAGCGACCATTTTCCTCTTCTGAGCTGGTTAGATTTACAGGGAGTGAGAAAACGGTGCCGAAACCTTGTTGCTAGGGTTAATATATTTGTAAATAAAATCATTGATGAACATAGAGTGAAGAGAGCTAATCTTAATGAGGTCAAAGACGAAGTACGTAATGAGGCTGGAGATTTCGTTGACGTTCTGCTTGATCTCGAGAAAGATCATAAACTCTCCCATTCCGATATGATCGCCATTCTTTGGGAAATGATTTTTCGAGGAACGGATACAGTCGCTATCCTACTAGAATGGATACTTGCGAGAATAGTATTACATCCAGAAATCCAATCCAAAGCACAATCAGAAATCGATTTGGTTATCGGAAATCCAGCCCGTCCTGTATCCGATTCCGACATCTCAAGCTTACCATATCTACAATCCATCGTGAAGGAATGTCTGAGAATGCACCCTCCCGGTCCATTACTCTCATGGGCCCGTCTAGCAATCCACGACGTTAACATTTCCGGGAACTTCATTCCAGCGGGAACGACAGCCATGGTGAACATGTGGGCAATAACGCACGACGAAAGGGTCTGGTCCGAACCAGAGACATTCAAACCGGAACGGTTCATGGAAGAAGAAGTGAGTGTATTGGGAAGTGATCTGAGGTTGGCGCCGTTCGGGTCGGGCAGACGGGTTTGTCCGGGAAAAGCAATGGGGTTAGCCACCGTGCATCTCTGGCTGGCCCAGTTACTCCAGACCTTCAAGTGGGTTGTCGCCGGCGGCTGTGATGACGTGGACTTGTCAGAGTGCCTGAAGCTCTCAATGGAGATGAACAGTCCTCTGGTTTGTAAGGCCGTGCCTAGGGCTGTTACCGCTGTTTGA | 1581 | 48.51 | MTSAIDFLYLQSSIISFEALLCLLIFTATFAYFLAPGGLAWAISKSKTRFAIPGPSGFPLVGLLCVFNGSRTPHRVLAKLARTFHAQRLMAFSVGLTRFVISSHPDTAKEVLNSSAFADRPVKESAYELLFHRAMGFAPYDGYWRELRRISSTHLFSPRRIATSEGFRREMGLKMVEEINSRMADNGKVHIKRILHFGSLNNVMKTVFGKSYECIEGGEWLELEKMVSEGYELLGIFNWSDHFPLLSWLDLQGVRKRCRNLVARVNIFVNKIIDEHRVKRANLNEVKDEVRNEAGDFVDVLLDLEKDHKLSHSDMIAILWEMIFRGTDTVAILLEWILARIVLHPEIQSKAQSEIDLVIGNPARPVSDSDISSLPYLQSIVKECLRMHPPGPLLSWARLAIHDVNISGNFIPAGTTAMVNMWAITHDERVWSEPETFKPERFMEEEVSVLGSDLRLAPFGSGRRVCPGKAMGLATVHLWLAQLLQTFKWVVAGGCDDVDLSECLKLSMEMNSPLVCKAVPRAVTAV | 526 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 2552386 | 2554369 | - | Conep09aG0054400.1 | Cone9ag0534 | 444697 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone9ag0534 | 526 | PRINTS | E-class P450 group I signature | 420 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0534 | 526 | PRINTS | E-class P450 group I signature | 378 | 396 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0534 | 526 | PRINTS | E-class P450 group I signature | 456 | 466 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0534 | 526 | PRINTS | E-class P450 group I signature | 466 | 489 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0534 | 526 | PRINTS | E-class P450 group I signature | 334 | 360 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0534 | 526 | PRINTS | E-class P450 group I signature | 314 | 331 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0534 | 526 | PRINTS | E-class P450 group I signature | 198 | 216 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0534 | 526 | SUPERFAMILY | Cytochrome P450 | 52 | 521 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0534 | 526 | Coils | Coil | 273 | 293 | - | - | |
| Cone9ag0534 | 526 | CDD | CYP78 | 85 | 514 | - | - | |
| Cone9ag0534 | 526 | PANTHER | CYTOCHROME P450 78A7-RELATED | 17 | 518 | IPR051996 | - | |
| Cone9ag0534 | 526 | Gene3D | Cytochrome P450 | 41 | 519 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0534 | 526 | FunFam | Cytochrome P450 78A5 | 44 | 521 | - | - | |
| Cone9ag0534 | 526 | Pfam | Cytochrome P450 | 53 | 494 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0534 | 526 | PRINTS | P450 superfamily signature | 457 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0534 | 526 | PRINTS | P450 superfamily signature | 466 | 477 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0534 | 526 | PRINTS | P450 superfamily signature | 379 | 390 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0534 | 526 | PRINTS | P450 superfamily signature | 325 | 342 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0534 | 526 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 459 | 468 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone6ag1341 | Cone-Chr6:10811073 | Cone9ag0534 | Cone-Chr9:2552386 | 3.71E-157 | dispersed | |
| Cone8ag0751 | Cone-Chr8:7588980 | Cone9ag0534 | Cone-Chr9:2552386 | 2.90E-173 | dispersed | |
| Cone9ag0534 | Cone-Chr9:2552386 | Cone9ag1296 | Cone-Chr9:9722159 | 3.23E-152 | dispersed | |
| Cone16ag0218 | Cone-Chr16:1516225 | Cone9ag0534 | Cone-Chr9:2552386 | 1.51E-239 | wgd | |
| Cone2ag0555 | Cone-Chr2:3128428 | Cone9ag0534 | Cone-Chr9:2552386 | 1.18E-56 | wgd | |
| Cone6ag0519 | Cone-Chr6:2591809 | Cone9ag0534 | Cone-Chr9:2552386 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone9ag0534 | K20619 | - | mdm:103416489 | 754.207 |