Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0537 ATGAAGCCACCACGGGCTTCTTGTCTTCCTTCAGATCTTCCTAGACCCACTTCTTTGCATGACTTTAGAAAGTCAAGTGCAGTAGATGGGTATACAAATCGTGGGCTCTGTATCTCGGGCCAGAAGAAGAGAGGTCATGGGAGCCGTTCTTGGATAAAGATCGATCAAAATGGAAACTCAAAGGTACTAGAGCTTGACAAGGCTACAATAATGAGGCAGTGTTCTTTACCTTCAAGAGATCTACGGTTTTTGGATCCTCTGTTCATTTACCCTTCTATGATATTGGGTCGAGAGAAGGCGATTGTTGTGAGCCTTGAAGAAATCCGATGTATTATCACTTCCGAGGAGGTTATTCTTATGAACTCTTTAAATGGATGTGTTGTTCATTACAAGTCTGAATTGTGCAAGCGCCTTCAGACGATGAAAGATCAATCTGATGATTTGCCCTTTGAGTTTAGGGCATTGGAGCTGGCTTTGGAGCTAACTTGCATGTCTCTAGATGATCAAGTGAAAGAGCTGGAAATGGAGATATACCCTGTTCTAGATGAACTAGCATCATCTATTAACACTCTTAATCTTGAACGGGTTCGTAGATTCAAAGGTCACCTCCTTGCTTTGACTCAACGAGTTCAGAAGCTTCGTGATGAAATCGAGCATCTTATGGATGATGATGGTGACATGGCTGAGATGCATCTAACAGAGAAGAAACAGAGGTTACAAGAAGCTTATGATCCAAGTAACCTCCATTTTCAATCTTCAGATTCCTTGGATGAAAACGAAACTAGGGTGCTTCTAAAATCTGCTCCGGTCTCTCCAGTGGCATTTTCAAGCCACGGGGCTCAGAAATTGCAAAGGGCTTTTAGCAGTATTGTCACTTCAAGTAGAGTAGGAAGCTCCAATTCTTCAAACAACGAAGAAAACATTGTACAGTTGGAAATGTTGCTCGAAGCTTACTTTGTGGTTATTGACAATACACTCAACAACTTGTTATCTCTCAAAGAATACATTGATGATACAGAAGATCTAATCAACATTAAACTGGGGAATGTACAGAACCACCTAATTCAATTTCAGTTGCTTCTTACAGCAGCTACGTTCTTGGCTACAATGTTTGCTGCTGTGACCGCTGTTTTCGGTATGAACTTTGAAGATGCAATCTTTGATTCTTCATCTTCTTTCCATTGGGTTGTTATTGGAAGCAGTGTTGCTTGTGGGATTTTCTACTTTTCTTTCCTCTTATATTTTCGTTACAAGAAAGCTTTTCCTTTGTAA 1272 40.64 MKPPRASCLPSDLPRPTSLHDFRKSSAVDGYTNRGLCISGQKKRGHGSRSWIKIDQNGNSKVLELDKATIMRQCSLPSRDLRFLDPLFIYPSMILGREKAIVVSLEEIRCIITSEEVILMNSLNGCVVHYKSELCKRLQTMKDQSDDLPFEFRALELALELTCMSLDDQVKELEMEIYPVLDELASSINTLNLERVRRFKGHLLALTQRVQKLRDEIEHLMDDDGDMAEMHLTEKKQRLQEAYDPSNLHFQSSDSLDENETRVLLKSAPVSPVAFSSHGAQKLQRAFSSIVTSSRVGSSNSSNNEENIVQLEMLLEAYFVVIDNTLNNLLSLKEYIDDTEDLINIKLGNVQNHLIQFQLLLTAATFLATMFAAVTAVFGMNFEDAIFDSSSSFHWVVIGSSVACGIFYFSFLLYFRYKKAFPL 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2568874 2571251 + Conep09aG0054700.1 Cone9ag0537 444700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0537 423 Pfam Magnesium transporter MRS2-like 54 240 - -
Cone9ag0537 423 Coils Coil 203 223 - -
Cone9ag0537 423 Gene3D Magnesium transport protein CorA, transmembrane region 126 354 - -
Cone9ag0537 423 CDD Mrs2_Mfm1p-like 51 419 IPR039204 -
Cone9ag0537 423 FunFam Magnesium transporter MRS2-1 39 122 - -
Cone9ag0537 423 Gene3D - 37 122 - -
Cone9ag0537 423 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 39 419 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0276 Cone-Chr17:1309074 Cone9ag0537 Cone-Chr9:2568874 2.02E-129 dispersed
Cone20ag1134 Cone-Chr20:7734583 Cone9ag0537 Cone-Chr9:2568874 3.25E-94 dispersed
Cone7ag1020 Cone-Chr7:7874808 Cone9ag0537 Cone-Chr9:2568874 2.40E-81 dispersed
Cone8ag1071 Cone-Chr8:9710444 Cone9ag0537 Cone-Chr9:2568874 3.24E-39 dispersed
Cone9ag0537 Cone-Chr9:2568874 Cone11ag0946 Cone-Chr11:7720456 4.83E-137 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0537 K16075 - vvi:100262794 533.872