Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0540 ATGGAGAAGGTGAAAATGCAATGGTGGAGTTTACTTGTACTACTCCTTGCTGTGGTAACCCTAGAAATGGCAATGTCTCATGGTCTTCATCCTCTGGCTCATATAGAGATCCACAAGACTGTTTTCGCGCTTGATTCCAGAGCTTACATCAAAGCCTCTCCTACTCTTCTCGGTCTCTCTGGACAAAACACACAGTATATTACAGTTGAGTACCATAGCCCAAATCCATCAATCGAGGATTTCATTGCAGTTTTTTCGCCTGCAAATTTCAGTGCTGCTTCCTGCCCGAAAGAAAATTCGATGGTTGTTGCTCCACTGCTGTGCACAGCACCTATTAAGTATCAGTATGCAAATTACTCGAATTCTAACTACAAAGCAACAGGGAAAGGTTTGCTGAAGCTTCAATTGATTAAGCAGAGATCTGACTTTTCCTTCGCATTATTCACTGGTGGTGTATCAAATCCCAAACTGGTGGCAGTTTCAAATACAGTCAGATTTGTGAACCCAAATGCTCCAGTTTATCCACGGTTAGCGCAAGGGAAATTGTGGAACGAAATGACTGTAACATGGACCAGCGGATACGGGATTGATGTAGCAGAGCCTTTTGTGGAATGGGGTCCAATAGGAGGAGTTAGGATGAGTTCTTCTGCTGGGACACTCACATTTGATCGCAACACCATGTGCGATGCACCAGCCAGGACAGTAGGGTGGCGTGATCCTGGCTATATACATACTGCCTTTCTGAAGGAATTGTGGCCCAACAGAAAGTATGCATACAAGCTTGGGCATAAATTAATTAACGGTACATACATCTGGAGTTCAGAATATATATTTAAATCATCTCCATATCCTGGTCAAAATTCTCTACAACGTGTAATCATATTTGGCGACATGGGAAAGGGTGAAGAAGATGGATCCTACGAGTATAATAACTATCAGCCTGGTGCTTTGAACACAACAAATCAGCTTGTACAAGACTTGGAGAACTTTGATATGGTCTTCCACAATGGCGATATTGTTTATGCTACCGGATATATATCACAGTGGGACCAATTTACTGCACAGATAGAACCAATTGCATCAACTAAACCATACATGATTTCAAGTGGTAACCATGAGAGAGACTGGCCAGGAACAGGATCCTTCTACCAGAACAAAGATTCAGGTGGAGAATGTGGTGTATTAGCCCAGACCATGTTTTACGTTCCTGCTGAGAACAGGGCTCAGTTCTGGTACACCTCTGATTACGGCATGTTCAGATTCTGCGTAGCACACACTGAACTTGATTGGAGAGAGGGCTCAGAGCAATACAAGTTCATTGAGAACTGCCTAGCCTCGGTTGACAGACAAAAGCAACCGTGGCTCATCTTTTTGGCTCACAGAGTGTTGGGCTATTCTTCTGCAGGGTTTTATGTGGCAGAGGGATCCTTTGAAGAACCAATGGGAAGGGAGAGCCTTCAGAAACTCTGGCAAAAATACAAGGTTGACATTGCCGTGTATGGCCACGTACACAATTATGAAAGAACATGTCCTATCTACGAGAATATCTGCACTAGCCAGGAGAAGAACAATTACCGGGGAAGCTTAAATGGGACAATACATGTGGTGGCCGGAGGTGGCGGATCGAGCCTTGCAACATTTGCTCCGGTGAACACAGCTTGGAGCATTTACAAAGACTATGATTATGGCTTCACTAAACTCACTGCATTCAACAATTCCCATCTGCTTTTCGAGTACAAAAAGAGCAGTAACGGAAAAGTTTACGACTCTTTCACTATAACCAGAGATTATAGGGATATCTTGGCTTCAACTATTGATAGTTCCTCACCTACAACTTTGGCCTTTTGA 1848 43.51 MEKVKMQWWSLLVLLLAVVTLEMAMSHGLHPLAHIEIHKTVFALDSRAYIKASPTLLGLSGQNTQYITVEYHSPNPSIEDFIAVFSPANFSAASCPKENSMVVAPLLCTAPIKYQYANYSNSNYKATGKGLLKLQLIKQRSDFSFALFTGGVSNPKLVAVSNTVRFVNPNAPVYPRLAQGKLWNEMTVTWTSGYGIDVAEPFVEWGPIGGVRMSSSAGTLTFDRNTMCDAPARTVGWRDPGYIHTAFLKELWPNRKYAYKLGHKLINGTYIWSSEYIFKSSPYPGQNSLQRVIIFGDMGKGEEDGSYEYNNYQPGALNTTNQLVQDLENFDMVFHNGDIVYATGYISQWDQFTAQIEPIASTKPYMISSGNHERDWPGTGSFYQNKDSGGECGVLAQTMFYVPAENRAQFWYTSDYGMFRFCVAHTELDWREGSEQYKFIENCLASVDRQKQPWLIFLAHRVLGYSSAGFYVAEGSFEEPMGRESLQKLWQKYKVDIAVYGHVHNYERTCPIYENICTSQEKNNYRGSLNGTIHVVAGGGGSSLATFAPVNTAWSIYKDYDYGFTKLTAFNNSHLLFEYKKSSNGKVYDSFTITRDYRDILASTIDSSSPTTLAF 615
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2580053 2584917 - Conep09aG0055000.1 Cone9ag0540 444703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0540 615 CDD MPP_PAPs 290 595 IPR041792 -
Cone9ag0540 615 Pfam Calcineurin-like phosphoesterase 291 506 IPR004843 GO:0016787(InterPro)
Cone9ag0540 615 Pfam Iron/zinc purple acid phosphatase-like protein C 531 590 IPR025733 -
Cone9ag0540 615 SUPERFAMILY Purple acid phosphatase, N-terminal domain 150 282 IPR008963 GO:0003993(InterPro)|GO:0046872(InterPro)
Cone9ag0540 615 Gene3D - 171 284 - -
Cone9ag0540 615 Pfam Fn3-like domain from Purple Acid Phosphatase 50 168 IPR040974 -
Cone9ag0540 615 SUPERFAMILY Metallo-dependent phosphatases 290 597 IPR029052 -
Cone9ag0540 615 PANTHER PURPLE ACID PHOSPHATASE-RELATED 29 598 - -
Cone9ag0540 615 Pfam Purple acid Phosphatase, N-terminal domain 176 279 IPR015914 GO:0003993(InterPro)|GO:0046872(InterPro)
Cone9ag0540 615 Gene3D - 286 599 IPR029052 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag1034 Cone-Chr3:29133309 Cone9ag0540 Cone-Chr9:2580053 1.39E-97 dispersed
Cone6ag0528 Cone-Chr6:2623351 Cone9ag0540 Cone-Chr9:2580053 0 dispersed
Cone9ag0540 Cone-Chr9:2580053 Cone9ag0553 Cone-Chr9:2629585 2.97E-07 dispersed
Cone9ag0538 Cone-Chr9:2573539 Cone9ag0540 Cone-Chr9:2580053 0 proximal
Cone9ag0540 Cone-Chr9:2580053 Cone9ag0541 Cone-Chr9:2586007 6.86E-160 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0540 K22390 - gmx:100817130 982.63