Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0543 ATGCTCGCTCTCACCGGCTGCTCAGTCTCAGCCGCACCATTTTCAATGAAATACAGTAGGCCAAGGCGCTTCAGGATTCTAGCTGATGGATTTCCTTCTTTTCTGCCTAAAGAAGTTGAGAAAATCAAAGACCCATTGGCTCGGAAATTCGCTGCTAGAATCGAAAGGCTACCTGTCAAATTCTCTGATAATAGTATACCGAGTAGCGTTGTGAGGCCATTGACACAGAGGGAGACAAGTCCAGTAGTTCTTCTCCATGGTTTTGACAGCTCATGTTTAGAGTGGAGATACACATATCCATTGCTCGAGGAGGCTGGTTTCGAAACTTGGGCTGTTGACATTCTTGGTTGGGGCTTCTCTGATTTAGAAAGACTACCATCATGTGATGTGGCATCTAAGCGCAATCACTTTTATCAGCTATGGAAGTCGTACATAAAGAAGCCAATGATATTGGTGGGACCAAGTCTCGGTGCTGCAGTTGCCATTGATTTTGCAGTCTACTATCCAGAAGCTGTAGAAAGGCTAGTTTTGATCGATGCAAGTGTATATGCAGAAGGCACTGAAAACTTAGCAACCTTACCTAGACTGGCAGCTTATGCTGGGGTGTACCTATTGAAGAGCATCCCACTGCGCTTGTATGTAAGCTTTTTGGTCTTCAATCAGATATCATTTGATATTATCCAAGATTGGACTAATATCGGTCGATTGCACTGTTTGCTCCCTTGGTGGGAAGATGCTACCGTAGATTTCATGATAAGTGGGGGTTATAATGTAACCAACCTGATAAAAAAGGTAAAGCAGAAGACACTCATCATATGGGGCGAGGAGGATCAAATCATCAGTAGCAAGCTTGCAGTGAGATTGCACTGTGAACTGCCAAATGCAATCATCCGCCAAATACCTGATTGTGGTCACCTTCCTCATGTCGAAAACCCAAGCAAAATCGTCAAATTGATGGAGGAATTTCTCAGGCAAGGTTCCAGAAAGGAGGATCGGTACTTTACTCAAAACTAA 1014 43.89 MLALTGCSVSAAPFSMKYSRPRRFRILADGFPSFLPKEVEKIKDPLARKFAARIERLPVKFSDNSIPSSVVRPLTQRETSPVVLLHGFDSSCLEWRYTYPLLEEAGFETWAVDILGWGFSDLERLPSCDVASKRNHFYQLWKSYIKKPMILVGPSLGAAVAIDFAVYYPEAVERLVLIDASVYAEGTENLATLPRLAAYAGVYLLKSIPLRLYVSFLVFNQISFDIIQDWTNIGRLHCLLPWWEDATVDFMISGGYNVTNLIKKVKQKTLIIWGEEDQIISSKLAVRLHCELPNAIIRQIPDCGHLPHVENPSKIVKLMEEFLRQGSRKEDRYFTQN 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2595068 2598882 + Conep09aG0055300.1 Cone9ag0543 444706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0543 337 PRINTS Epoxide hydrolase signature 106 121 IPR000639 GO:0003824(InterPro)
Cone9ag0543 337 PRINTS Epoxide hydrolase signature 300 322 IPR000639 GO:0003824(InterPro)
Cone9ag0543 337 PRINTS Epoxide hydrolase signature 86 104 IPR000639 GO:0003824(InterPro)
Cone9ag0543 337 PRINTS Epoxide hydrolase signature 165 178 IPR000639 GO:0003824(InterPro)
Cone9ag0543 337 Pfam Alpha/beta hydrolase family 82 316 IPR000073 -
Cone9ag0543 337 PANTHER HYDROLASE 29 326 - -
Cone9ag0543 337 SUPERFAMILY alpha/beta-Hydrolases 80 324 IPR029058 -
Cone9ag0543 337 PRINTS Alpha/beta hydrolase fold signature 151 164 IPR000073 -
Cone9ag0543 337 PRINTS Alpha/beta hydrolase fold signature 165 178 IPR000073 -
Cone9ag0543 337 PRINTS Alpha/beta hydrolase fold signature 269 283 IPR000073 -
Cone9ag0543 337 PRINTS Alpha/beta hydrolase fold signature 106 121 IPR000073 -
Cone9ag0543 337 Gene3D alpha/beta hydrolase 71 332 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0499 Cone-Chr16:7066304 Cone9ag0543 Cone-Chr9:2595068 6.56E-140 dispersed
Cone9ag0543 Cone-Chr9:2595068 Cone2ag0510 Cone-Chr2:2797557 1.71E-141 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0543 - - - 0.0