Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0543 ATGCTCGCTCTCACCGGCTGCTCAGTCTCAGCCGCACCATTTTCAATGAAATACAGTAGGCCAAGGCGCTTCAGGATTCTAGCTGATGGATTTCCTTCTTTTCTGCCTAAAGAAGTTGAGAAAATCAAAGACCCATTGGCTCGGAAATTCGCTGCTAGAATCGAAAGGCTACCTGTCAAATTCTCTGATAATAGTATACCGAGTAGCGTTGTGAGGCCATTGACACAGAGGGAGACAAGTCCAGTAGTTCTTCTCCATGGTTTTGACAGCTCATGTTTAGAGTGGAGATACACATATCCATTGCTCGAGGAGGCTGGTTTCGAAACTTGGGCTGTTGACATTCTTGGTTGGGGCTTCTCTGATTTAGAAAGACTACCATCATGTGATGTGGCATCTAAGCGCAATCACTTTTATCAGCTATGGAAGTCGTACATAAAGAAGCCAATGATATTGGTGGGACCAAGTCTCGGTGCTGCAGTTGCCATTGATTTTGCAGTCTACTATCCAGAAGCTGTAGAAAGGCTAGTTTTGATCGATGCAAGTGTATATGCAGAAGGCACTGAAAACTTAGCAACCTTACCTAGACTGGCAGCTTATGCTGGGGTGTACCTATTGAAGAGCATCCCACTGCGCTTGTATGTAAGCTTTTTGGTCTTCAATCAGATATCATTTGATATTATCCAAGATTGGACTAATATCGGTCGATTGCACTGTTTGCTCCCTTGGTGGGAAGATGCTACCGTAGATTTCATGATAAGTGGGGGTTATAATGTAACCAACCTGATAAAAAAGGTAAAGCAGAAGACACTCATCATATGGGGCGAGGAGGATCAAATCATCAGTAGCAAGCTTGCAGTGAGATTGCACTGTGAACTGCCAAATGCAATCATCCGCCAAATACCTGATTGTGGTCACCTTCCTCATGTCGAAAACCCAAGCAAAATCGTCAAATTGATGGAGGAATTTCTCAGGCAAGGTTCCAGAAAGGAGGATCGGTACTTTACTCAAAACTAA 1014 43.89 MLALTGCSVSAAPFSMKYSRPRRFRILADGFPSFLPKEVEKIKDPLARKFAARIERLPVKFSDNSIPSSVVRPLTQRETSPVVLLHGFDSSCLEWRYTYPLLEEAGFETWAVDILGWGFSDLERLPSCDVASKRNHFYQLWKSYIKKPMILVGPSLGAAVAIDFAVYYPEAVERLVLIDASVYAEGTENLATLPRLAAYAGVYLLKSIPLRLYVSFLVFNQISFDIIQDWTNIGRLHCLLPWWEDATVDFMISGGYNVTNLIKKVKQKTLIIWGEEDQIISSKLAVRLHCELPNAIIRQIPDCGHLPHVENPSKIVKLMEEFLRQGSRKEDRYFTQN 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2595068 2598882 + Conep09aG0055300.1 Cone9ag0543 444706

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0543 337 PRINTS Epoxide hydrolase signature 106 121 IPR000639 GO:0003824(InterPro)
Cone9ag0543 337 PRINTS Epoxide hydrolase signature 300 322 IPR000639 GO:0003824(InterPro)
Cone9ag0543 337 PRINTS Epoxide hydrolase signature 86 104 IPR000639 GO:0003824(InterPro)
Cone9ag0543 337 PRINTS Epoxide hydrolase signature 165 178 IPR000639 GO:0003824(InterPro)
Cone9ag0543 337 Pfam Alpha/beta hydrolase family 82 316 IPR000073 -
Cone9ag0543 337 PANTHER HYDROLASE 29 326 - -
Cone9ag0543 337 SUPERFAMILY alpha/beta-Hydrolases 80 324 IPR029058 -
Cone9ag0543 337 PRINTS Alpha/beta hydrolase fold signature 151 164 IPR000073 -
Cone9ag0543 337 PRINTS Alpha/beta hydrolase fold signature 165 178 IPR000073 -
Cone9ag0543 337 PRINTS Alpha/beta hydrolase fold signature 269 283 IPR000073 -
Cone9ag0543 337 PRINTS Alpha/beta hydrolase fold signature 106 121 IPR000073 -
Cone9ag0543 337 Gene3D alpha/beta hydrolase 71 332 IPR029058 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0543 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0499 Cone-Chr16:7066304 Cone9ag0543 Cone-Chr9:2595068 6.56E-140 dispersed
Cone9ag0543 Cone-Chr9:2595068 Cone2ag0510 Cone-Chr2:2797557 1.71E-141 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g45 . Blo16g01089 . Bda11g01180 Bpe13g01378 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone9ag0543 . . . . . . . Bda11g01180 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001673 2 3 2 2 3 2 3 2 2 2 2 2 2 2 2 3 2 3 3 2 3 3 2 2 2 2 2 3 3 2 70