Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0544 ATGGCGCCTGTTCTTTCAATGTGTCTCGTCCTCTTCCTCTCCCTCACTTCTCATTCAAGTGCAACTTATTGTATATGTAAAACAGGGCAAACAGAGCAAGCCCTTCAGAAAACACTAGACTATGCATGTGGAGCAGGAGCTGACTGCTCCCCTATTCTCCAAACGGGAGCTTGTTATCAGCCTAACACTATTCAAGACCACTGCAACTATGCCGTTAATAGCTATTTCCAGAAGAAAGGTCAGGTCTCAGGCAGCTGTGATTTCTCCGGTGCCGCCACTCCTTCCACTACTGCTCCTACTGTAAGTGGTTCTTGTGTTTATCCCAGCTCCAGTACTTCAACAACACCTACAACCACAACCACCTCGCCAACAAACGGAACTCCAACCAGCAATACCACAGCAAGTCCCTCGACCACCACAGCGACGCCATCAACTACCACAACAACCACCGGAATAACCCCATCAGTGTACGGAACAGGGATTAGTCCAACAGGCACAAGCATAACTGATGCAAGTGGTGGTAGGGAAGGTACTAAATTATCCTATGCACTTGTTCTTCTTACCCTCTGGTTTTCAGGTTTTTTCCTGTGGGGCTGA 597 48.07 MAPVLSMCLVLFLSLTSHSSATYCICKTGQTEQALQKTLDYACGAGADCSPILQTGACYQPNTIQDHCNYAVNSYFQKKGQVSGSCDFSGAATPSTTAPTVSGSCVYPSSSTSTTPTTTTTSPTNGTPTSNTTASPSTTTATPSTTTTTTGITPSVYGTGISPTGTSITDASGGREGTKLSYALVLLTLWFSGFFLWG 198
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2599542 2601302 - Conep09aG0055400.1 Cone9ag0544 444707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0544 198 MobiDBLite consensus disorder prediction 94 158 - -
Cone9ag0544 198 PANTHER BETA-1,3 GLUCANASE 12 111 IPR044788 -
Cone9ag0544 198 Pfam X8 domain 23 93 IPR012946 -
Cone9ag0544 198 Gene3D - 16 122 - -
Cone9ag0544 198 SMART X8_cls 22 107 IPR012946 -
Cone9ag0544 198 FunFam Glucan endo-1,3-beta-glucosidase 4 17 111 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone9ag0544 Cone-Chr9:2599542 Cone6ag1096 Cone-Chr6:6789928 9.20E-23 dispersed
Cone13ag0909 Cone-Chr13:7997567 Cone9ag0544 Cone-Chr9:2599542 7.03E-47 wgd
Cone13ag0038 Cone-Chr13:228804 Cone9ag0544 Cone-Chr9:2599542 1.92E-39 wgd
Cone16ag0202 Cone-Chr16:1333894 Cone9ag0544 Cone-Chr9:2599542 4.58E-38 wgd
Cone19ag0903 Cone-Chr19:7037382 Cone9ag0544 Cone-Chr9:2599542 2.06E-49 wgd
Cone2ag0806 Cone-Chr2:34067696 Cone9ag0544 Cone-Chr9:2599542 3.27E-38 wgd
Cone6ag0530 Cone-Chr6:2634454 Cone9ag0544 Cone-Chr9:2599542 1.16E-80 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0544 - - - 0.0