Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0550 ATGGGTTCCAAACGAGCTTTTGACAGTAAAGAGTTCGAGGAGATTCCATATAAGCACCCTAGACAACATGAAAGTATCGACAAGCCAGCCTCATTTTCTGAATTGGCTCCTTTGTATCTCTTCCCCCAGAAACTTGAATTTTCAGGTCAGAATGAGGGTGGCTTTCACGAGCTTCAATGGCATGATGCTCTTGAAAAGGATACTTTTACTGAAATCTCAGATTTTGATGACAAGGATCTTGAGAGCAGTAACCCTTTCTCCTGGGTCACCAGTATTTCTAGTGAAGAAGACACTGGTTCTGGAGGAACTACTTTGACTCCTTTGTCACCAGAACATGGTGAATATAATTTCCCTCGAAGAACATTTTCTCCATCTGAGGATGCATATTCGTCTTTATTGTATTGCTCTCCTAGAAAGCAAGTTCCTATTGGACCAAATCATCAAGCCAGTCTTCCAATATGGCGTGGATTTATTGAAGGGACCAAGTTGGACATCAATGATAATTTAAAGGAGGAGAAGCTGATGGGGACTTGTGTTATTCCAATGCCCTACTTGAATTTGCTTGAACAAGAAGATGTAAAGAGTGGAGAATCCCAAATGGATTGTGACTGCACGGAGGAGGGATCTGTTAGATGTATACGGCAACATATCACAGAATCAAGGGAAAAGTTGAGGAGAACTCTTGGCGATGAAAAGTTTGTGAATTTGGGGTTCTTAGACATGGGTGAGGAAGTTAATTGTAAATGGAGTGAAGAAGAAGAACAGATGTTTCATGATACCGTCTATTCCAATCCAAAATTGTCAGGCCGGAATTTTTGGACTCACTTGTCGGTGCCTTTACCTGCTCGCAATAAAAAGGAACTTGTTAGCTATTATTTTAATGTATTTATCCTTCGAAGGCGTGCCACTCAAAACCGATCCCAGTTCCTTGACGTTGATAGTGATGATGATGAATGGCAAGGAAGAAGGAATATAGGTTCTTACAGATTTCAAGTGCAAGTAGAACATGAAGACTCCGCGATTGAATCACTTGTTGTTCAAGTTGGTCGTGGTGGCCATGAAGTAGATTCCTCTGAAGAGGAAGAAAGTGGAAATATTGATGATGAAAGTGAAGAAGAGGGTGGAGTTGAAGAAGATACAGTTGATCCCATTGTTCATAATTTGGACAAGAATGCAGAGAAGGATCTTCATGGCGGACAAGATGATTCTTGCATGTCTTTGGAAAGTCAGTTTAAGATGTCTGATTTATGTCGTCCAGATGATGATACTGTGTCTGAACAGCAGATAACTGGAGGTAAAACTGGGATTGGAAGATCTTTGCATAGTAAATCCAATGTTTCTGGTTATAATTTGTCTGAGCCAAGTGCTATTAAAGCTTGGGATGTTAGGTTGCTTACCCGTCCACGAGAAGATGCAGAACTCTTACCAACTTGGAAAATGATTGAAGAGATTTTTGGACAAGATGTGGAGTTTAACAAGATGGATCATGGGAAAGGCTCCAGTTAG 1506 40.77 MGSKRAFDSKEFEEIPYKHPRQHESIDKPASFSELAPLYLFPQKLEFSGQNEGGFHELQWHDALEKDTFTEISDFDDKDLESSNPFSWVTSISSEEDTGSGGTTLTPLSPEHGEYNFPRRTFSPSEDAYSSLLYCSPRKQVPIGPNHQASLPIWRGFIEGTKLDINDNLKEEKLMGTCVIPMPYLNLLEQEDVKSGESQMDCDCTEEGSVRCIRQHITESREKLRRTLGDEKFVNLGFLDMGEEVNCKWSEEEEQMFHDTVYSNPKLSGRNFWTHLSVPLPARNKKELVSYYFNVFILRRRATQNRSQFLDVDSDDDEWQGRRNIGSYRFQVQVEHEDSAIESLVVQVGRGGHEVDSSEEEESGNIDDESEEEGGVEEDTVDPIVHNLDKNAEKDLHGGQDDSCMSLESQFKMSDLCRPDDDTVSEQQITGGKTGIGRSLHSKSNVSGYNLSEPSAIKAWDVRLLTRPREDAELLPTWKMIEEIFGQDVEFNKMDHGKGSS 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2618445 2620050 + Conep09aG0056000.1 Cone9ag0550 444713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0550 501 MobiDBLite consensus disorder prediction 349 381 - -
Cone9ag0550 501 MobiDBLite consensus disorder prediction 360 378 - -
Cone9ag0550 501 MobiDBLite consensus disorder prediction 423 437 - -
Cone9ag0550 501 MobiDBLite consensus disorder prediction 91 110 - -
Cone9ag0550 501 MobiDBLite consensus disorder prediction 91 120 - -
Cone9ag0550 501 PANTHER DNA BINDING PROTEIN 1 493 - -
Cone9ag0550 501 MobiDBLite consensus disorder prediction 416 437 - -
Cone9ag0550 501 MobiDBLite consensus disorder prediction 1 28 - -
Cone9ag0550 501 CDD SANT 248 296 IPR001005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0526 Cone-Chr2:2898431 Cone9ag0550 Cone-Chr9:2618445 6.18E-53 dispersed
Cone6ag0789 Cone-Chr6:4014721 Cone9ag0550 Cone-Chr9:2618445 1.43E-25 dispersed
Cone9ag0550 Cone-Chr9:2618445 Cone9ag0791 Cone-Chr9:3797182 7.72E-28 dispersed
Cone13ag0045 Cone-Chr13:265074 Cone9ag0550 Cone-Chr9:2618445 1.55E-71 wgd
Cone19ag0908 Cone-Chr19:7062956 Cone9ag0550 Cone-Chr9:2618445 7.46E-85 wgd
Cone19ag0050 Cone-Chr19:325094 Cone9ag0550 Cone-Chr9:2618445 2.08E-66 wgd
Cone6ag0540 Cone-Chr6:2662307 Cone9ag0550 Cone-Chr9:2618445 1.29E-298 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0550 - - - 0.0