Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone9ag0551 | ATGAATGAAGAAGATAAGACCGATCCTGCAACCGAGTTCAACAGCCGCGCGAGCTGGATGCAGTTCGGAGCTGGCTACGATAGTGTTTACAGCTTCTTCTCCGGCGGCGATAGTGAGAGCAGTACACTAGGTGAGTTCGGATGGAACTTTGCAACGGACGATATGGACCAAGCCGGAAGCCAACATGGGCGGATCTCCGACTTAGACCGAATCGGTACTGGCGATAGGTTCAATTTGGCGGGAAATGTTGAGGTGCCGCCAGAGAAAAGTAGTAGCAGAGAGGTTGGGGGATCGGAACCGAGGATTTTGGTAGGATCGGTTAGTAAAGTTTCCACGTCCAATCCGTCGCTGTCTTCATGCTCGAGCGAAGATCCGCCTGAAAAGTCCACCGGATCCGGCGGGAAACCGCCTGAGATATCGAGTAGCAGTAGTAAGGTGGTCCAAAAGAAGGCCGTGAAAATGCAATTCCTGCAACCCCGGGTTGCATTCGTGACAAAGAGCCAAGTTGATAATCTTGAAGACGGCTACAGATGGAGAAAATATGGACAGAAGGCTGTCAAAAACAGTCCCTTCCCAAGGAGTTACTATCGCTGCACAAACAGTAAATGCACGGTGAAGAAAAGAGTAGAAAGATCATGGGAGGATCCAAGTATTGTAATAACAACATATGAAGGTCAACACTGCCATCAAACTGTAGGATTTTCCCGAGGTGGGGGATTCATTAGTACTACTCATGATCATGATCAATCAGCTCCCTTTGATCATGGGGGCCGTGGTCGATTATTACTGGCTTCTAATTCCGAACATCTCGATCGGATTAATAACCCGCGGTTTCGCTACCACTCTACCGTACTTCATCGTGGCGATCAGCTTATCACTATAACATCACATGAGTCAAAGTCGCAAACTAGCACTCCTTCAGGTGAAGGATTGCTTGCAGACATTGTCCCTCCTGGAATGCTTAACAGACCATGA | 975 | 48.51 | MNEEDKTDPATEFNSRASWMQFGAGYDSVYSFFSGGDSESSTLGEFGWNFATDDMDQAGSQHGRISDLDRIGTGDRFNLAGNVEVPPEKSSSREVGGSEPRILVGSVSKVSTSNPSLSSCSSEDPPEKSTGSGGKPPEISSSSSKVVQKKAVKMQFLQPRVAFVTKSQVDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSWEDPSIVITTYEGQHCHQTVGFSRGGGFISTTHDHDQSAPFDHGGRGRLLLASNSEHLDRINNPRFRYHSTVLHRGDQLITITSHESKSQTSTPSGEGLLADIVPPGMLNRP | 324 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2624393 | 2626734 | - | Conep09aG0056100.1 | Cone9ag0551 | 444714 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone9ag0551 | 324 | Pfam | WRKY DNA -binding domain | 173 | 230 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone9ag0551 | 324 | ProSiteProfiles | WRKY domain profile. | 167 | 232 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone9ag0551 | 324 | SUPERFAMILY | WRKY DNA-binding domain | 165 | 230 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone9ag0551 | 324 | MobiDBLite | consensus disorder prediction | 105 | 145 | - | - | |
Cone9ag0551 | 324 | MobiDBLite | consensus disorder prediction | 297 | 324 | - | - | |
Cone9ag0551 | 324 | SMART | WRKY_cls | 172 | 231 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone9ag0551 | 324 | MobiDBLite | consensus disorder prediction | 79 | 145 | - | - | |
Cone9ag0551 | 324 | Gene3D | WRKY domain | 159 | 225 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone9ag0551 | 324 | FunFam | WRKY transcription factor 57 | 158 | 232 | - | - | |
Cone9ag0551 | 324 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 114 | 242 | IPR044810 | GO:0003700(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone6ag0908 | Cone-Chr6:4663736 | Cone9ag0551 | Cone-Chr9:2624393 | 2.08E-33 | dispersed | |
Cone7ag0093 | Cone-Chr7:409523 | Cone9ag0551 | Cone-Chr9:2624393 | 1.52E-30 | dispersed | |
Cone9ag0551 | Cone-Chr9:2624393 | Cone9ag1265 | Cone-Chr9:9395529 | 2.89E-27 | dispersed | |
Cone13ag0914 | Cone-Chr13:8023565 | Cone9ag0551 | Cone-Chr9:2624393 | 3.96E-62 | wgd | |
Cone19ag0910 | Cone-Chr19:7071382 | Cone9ag0551 | Cone-Chr9:2624393 | 1.78E-60 | wgd | |
Cone2ag0536 | Cone-Chr2:2960579 | Cone9ag0551 | Cone-Chr9:2624393 | 8.56E-25 | wgd | |
Cone4ag0520 | Cone-Chr4:2323337 | Cone9ag0551 | Cone-Chr9:2624393 | 7.95E-26 | wgd | |
Cone6ag0541 | Cone-Chr6:2670377 | Cone9ag0551 | Cone-Chr9:2624393 | 4.03E-172 | wgd | |
Cone7ag0493 | Cone-Chr7:2269946 | Cone9ag0551 | Cone-Chr9:2624393 | 6.93E-25 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46803 | PF02631 | RecX | 1.70E-31 | No_clan | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone9ag0551 | - | - | - | 0.0 |