Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0558 ATGTACAGGAGAGTTTCCACAGCCGAAGCAACAGCCACAACCACTACGACGACCCAAGGAGGATCACCAATTGATAATGTGGATTATATTATTGTTAGTTTGAATCAAGTTCCAAGGTGGAGTGATGCAGAATATAGGTCTTCCTTGGAATTTGAGAGTGAAGATCCGTCCTTTTCTAATTCATACTTTCACGATCCTTTAACCTCTTTGTCTGGGTCAGAGGGTGGCATTAATGGAGTTGTTTCAAGGTTTCCCGTTGATCAGGAAATTAATTCTAAGATATATCTATGGAGAGGAAACCCGTGGAATCTTGAAGTGGATGCTGTAGTGAATTCTACTAATGAGAACCTGGATGAAGCACACAGTAGCCCTGGACTACATGCTGCAGCTGGTCCTTATCTTGCAGAAGAATGTGCATCATTGGGTGGCTGCCGCACCGGGATGGCAAAAGTAACTAATGCATATGACCTTCCTGCTAGGAGGGTTATACATACTGTTGGTCCAAAGTATGCAATTAAATATCATACTGCTGCAGAGAACGCTCTAAGTCATTGTTATCGTTCTTGCCTTGAGCTTCTGATTGAAAATGGGCTTCAAAGCATTGCAATGGGATGCATCTATACTGAGGCTAAAAACTATCCTCGTGAACCTGCTGCACATGTGGCTATAAGGACTGTCCGGAGGTTTCTTGAGAAGCAAAAGGATAAGATCAAAGCTGTTGTATTTTGTACCACCACATCATCAGATACTGAGATATATAAAAGATTGCTTCCACTTTACTTTCCCCGTGATAAACATGAGGAGCAAGTTGCCATGTTGAAGCTTCCTGCAGATGTTGGGGATGAGAATGGTGAGACTATTATAGATGAACGTAAAATCAGGATAAAGCCTTTGCCCAAAAAGAATATTCCAAAACCACCTCAAACTCCAGATGATCCTCCAATCAGTGATGTTGGGTTAACACGGAGGACTTCTACATATTTGGATACATATTTGGATCCTGCCTTCATGTCCTTAATCAAAGATCCTGATCAGAGACGCAAGGAACAGTGGGAAAAAACTGCACAAGCAAAGAGTGGATGGAATTGTGCTAAAATGCTTGGATTTGGTGACCTTGGTGGACCTCCGTTGTCTGTTGCTGAAGAATACTCACTTCATTCAAGATACCTTGCTAAAGCAAATTCTCTCAGTCTCTCTGAAATAGCAGAGATGAAAATTGTTTCCCGGGGTGGTGTTGACAGCGAAGGTCGTCCTGTAATGGTGGTTGTGGGGGCACATTTTCTGCTAAGGTGTCTTGATCTTGAGCGCTTTGTGCTCTATGTAGTGAAGGAATTTGAGCCGCTGATACAGAAACCTTATACAATTGTGTACTTCCACTCAGCAGCATCTTTACAGCCTCGACCGGACCTGGGTTGGATAAGAAGATTACAACAAATTATTGGCCGGAAACACCAGCGTAACCTTCATGCAATATACATTCTTCACCCTTCATTCGGACTTAAAGCTGCCATATTGGCTCTGCAACTGTTAGTAGACAATGTGGTGTGGAATAAAGTCGTATACATAGATCGTCTTCTTCAGCTGTTCAGATACGTTCCCCGTGAGCAGTTAACCATCCCCGACTTTGTATTTCAGCACGATTTAGAAGTGAATGGAGGGAAGGGTCTTATAGTTGACCCACGAACAAGATACGTGTATAATCGGCCTTGA 1710 42.87 MYRRVSTAEATATTTTTTQGGSPIDNVDYIIVSLNQVPRWSDAEYRSSLEFESEDPSFSNSYFHDPLTSLSGSEGGINGVVSRFPVDQEINSKIYLWRGNPWNLEVDAVVNSTNENLDEAHSSPGLHAAAGPYLAEECASLGGCRTGMAKVTNAYDLPARRVIHTVGPKYAIKYHTAAENALSHCYRSCLELLIENGLQSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKIKAVVFCTTTSSDTEIYKRLLPLYFPRDKHEEQVAMLKLPADVGDENGETIIDERKIRIKPLPKKNIPKPPQTPDDPPISDVGLTRRTSTYLDTYLDPAFMSLIKDPDQRRKEQWEKTAQAKSGWNCAKMLGFGDLGGPPLSVAEEYSLHSRYLAKANSLSLSEIAEMKIVSRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYTIVYFHSAASLQPRPDLGWIRRLQQIIGRKHQRNLHAIYILHPSFGLKAAILALQLLVDNVVWNKVVYIDRLLQLFRYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTRYVYNRP 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2642495 2647971 + Conep09aG0056800.1 Cone9ag0558 444721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0558 569 ProSiteProfiles Macro domain profile. 81 261 IPR002589 -
Cone9ag0558 569 CDD SEC14 404 540 IPR001251 -
Cone9ag0558 569 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 394 543 IPR001251 -
Cone9ag0558 569 SMART YBR022w_8 93 222 IPR002589 -
Cone9ag0558 569 SUPERFAMILY CRAL/TRIO domain 399 537 IPR036865 -
Cone9ag0558 569 Pfam Divergent CRAL/TRIO domain 416 547 IPR001251 -
Cone9ag0558 569 Gene3D - 399 550 IPR036865 -
Cone9ag0558 569 SMART sec14_4 400 546 IPR001251 -
Cone9ag0558 569 Gene3D Leucine Aminopeptidase, subunit E, domain 1 24 266 IPR043472 -
Cone9ag0558 569 MobiDBLite consensus disorder prediction 1 22 - -
Cone9ag0558 569 CDD Macro_GDAP2-like 92 260 IPR035793 -
Cone9ag0558 569 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 32 295 - -
Cone9ag0558 569 MobiDBLite consensus disorder prediction 7 22 - -
Cone9ag0558 569 SUPERFAMILY Macro domain-like 83 290 IPR043472 -
Cone9ag0558 569 Pfam Macro domain 110 222 IPR002589 -
Cone9ag0558 569 MobiDBLite consensus disorder prediction 298 319 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0547 Cone-Chr6:2693370 Cone9ag0558 Cone-Chr9:2642495 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0558 K24997 - cit:102618722 987.252