Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone9ag0577 | ATGATGACATGCGCTTGCATCATCATGTCGTGGATCTTAATCCATAGATGGAATCGGAGGAACAAGAAAGGCCCAAAAACATGGCCATTAGTAGGAGCAGCAATTGAACAGCTTTTGAACTATGATAGAATGCATGGTTGGCTTGTGAAGTACCTGTCTGAGTCCAAAACCGTAGTTGTTCCAATGCCTTTCACAACTTATACATACATTGCAGATCCTGTCAATGTAGAACATGTTCTTAAGAACAATTTCGCAAATTATCCAAAGGGAGAAATATACCATTCATATATGGAAGTACTGCTTGGAGATGGAATTTTCAATGCAGATGTTTTCAGAGATTATACCCTGAAACTCTTTGCTATTTTGAGTATGGCATCTTTCAATAACCAAGCAGTAGTAGATATGCAGGAACTCTTGATGAGAATGACTTTAGACTCCATATGTAGAGTAGGTTTTGGTGTAGAGATTGGAACATTAGCCCCCAATTTACCCGATAATCAATTTGCTCGAGCCTTTGACACAGTAAACATCATTGTGACACTTCGTTTCATTGACCCTTTGTGGAAGCTAAAGAGATTTGTGAATGTGGGTTCAGAAGCTCTACTTGATAAGAGCATCAAATCGATTGATGATTTCACTTGCTCAGTTATTCGAAGAAGGAAAGCAGAAATCAAAGAGACTCGACAGATCAACAATGACAATAAGATAAAGCATGATATACTACCATCAAGATTTATCGAGCTAGGTGACGACCCAGAAAACAATTTTACTGACAAGAGCCTTAGGGATGTTATTCTGAACTTTGTTATAGCTGGCCGAGACACTACAGCTACAACCCTCTCATGGGCCATTTACATGATAATGATAAATTCGCATGTAGCTGACAAGCTTTACTCAGAACTCCAAACTTGTGAGGAAGAGCAAGCTAAAGAGCAGAAAGTCCCATTATTGCAGTTTGATACAGTTGACCCTAAATCATTCAATAAAAGGATAACACAATTTGCACAACTCCTAAATTATGATTCACTAGGGAGATTATATTATTTGCATGCTGTTATCACTGAGACACTCCGTTTATACCCAGCAGTTTCTCAGGATCCTAAGGGGATTTTAGAGGATGATGTTTTGCCAGATGGAACAAAAGTAAGAGCAGGAGGCATGGTGACTTATGTGCCCTACTCAATGGGAAGAATGGAGTATAATTGGGGTTCTGATGCAGCTTCTTTTAAGCCAGAGAGGTGGCTTAAAGATGGTTTCTTCCAAAATGCGTCTCCATTCAAATTCACTGCATTTCAGATTTTACAAGTTCAAATTGGTACCCGGTCATCCAGTGAAGTACAGAATGATGACTATTCTATCAATGGCGCACGGCTTGAAGCTCACCGTAGCTGGACGCTCTTAGATTGCATTATACAGGGCCTTTCTAGCATAGCAGTATATAAGTTCTAA | 1449 | 39.48 | MMTCACIIMSWILIHRWNRRNKKGPKTWPLVGAAIEQLLNYDRMHGWLVKYLSESKTVVVPMPFTTYTYIADPVNVEHVLKNNFANYPKGEIYHSYMEVLLGDGIFNADVFRDYTLKLFAILSMASFNNQAVVDMQELLMRMTLDSICRVGFGVEIGTLAPNLPDNQFARAFDTVNIIVTLRFIDPLWKLKRFVNVGSEALLDKSIKSIDDFTCSVIRRRKAEIKETRQINNDNKIKHDILPSRFIELGDDPENNFTDKSLRDVILNFVIAGRDTTATTLSWAIYMIMINSHVADKLYSELQTCEEEQAKEQKVPLLQFDTVDPKSFNKRITQFAQLLNYDSLGRLYYLHAVITETLRLYPAVSQDPKGILEDDVLPDGTKVRAGGMVTYVPYSMGRMEYNWGSDAASFKPERWLKDGFFQNASPFKFTAFQILQVQIGTRSSSEVQNDDYSINGARLEAHRSWTLLDCIIQGLSSIAVYKF | 482 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 2720495 | 2722512 | + | Conep09aG0058700.1 | Cone9ag0577 | 444740 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone9ag0577 | 482 | Gene3D | Cytochrome P450 | 19 | 441 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0577 | 482 | PANTHER | CYTOCHROME P450 | 11 | 432 | - | - | |
| Cone9ag0577 | 482 | SUPERFAMILY | Cytochrome P450 | 14 | 431 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0577 | 482 | PRINTS | P450 superfamily signature | 271 | 288 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0577 | 482 | PRINTS | P450 superfamily signature | 351 | 362 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0577 | 482 | Pfam | Cytochrome P450 | 332 | 431 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0577 | 482 | Pfam | Cytochrome P450 | 128 | 309 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone9ag0577 | Cone-Chr9:2720495 | Cone12ag0152 | Cone-Chr12:779219 | 6.72E-12 | dispersed | |
| Cone6ag0571 | Cone-Chr6:2796642 | Cone9ag0577 | Cone-Chr9:2720495 | 5.57E-293 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone9ag0577 | K20495 | - | mdm:103451801 | 708.753 |