Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0652 ATGTGCCGTCAAAATTCCAATGTCCGTGCTGGAGAAGAGGCAACTATAGCAGAAGAGAATCTCCTAATATATTGCAAACCAGTAGAGCTCTATAATATTCTTCGCTGCCGTTCTCTTCACAATCCTTTGTTTCTTCAACGATCTTTGCATTACAAAAATCAAGCAAAGCGGAAAAGAAGGTTGAGGACTGGAGTTGTAATATTTAACTATAGAGACTATAATGACACGGTACAGAAGAGTGAAGTTACTGACGACTTCTCTTGCCCATTTTGCTTGATGCGATGTGCAAGCTTTAAGGGCCTGCGCTATCACTTGTGCGCTTCACATGACCTGTTCAATTTTGAGTTTTGGGTAACTGAAGAGTATCAGGCAGTGAATGTCTCTGTGAAAATCGATGTACTGAGATCTGAGACTGTAACAGATGGGCTAGACCCACAAGTACACACTTTCTCCTTCTGCTCAAAGCCACGGATGCGCGTGTCAAAGAACCCTGTTCAGAATGAAAAGCATCTGAATGTGCAATTCTTGGAGTTGGACTCACCCATGCTAGCCATGGAAGGCATACACAAGGGATTTCTTGGGAAGGAGGATGATGTTCTATCCTGTAGAAGTGAGAAGGTTTCCCAATTGCATCCCATTGAGAACCATGTGCAGAATGGAAAGCGTGAAAGAGAGAACTACGGTCCTGATTATCCAAGTTCCTCAGAGTGTATGGAACGAGTGGCATCTAGTTTCAATATTGCAGGCATTTCAATTGCAATGACTCAGTCTTCTACAGATCCTGAATGTGCAAAATCTCAGTCTGGAAGCGATCCTATGCAAACTGCTAAAGTGAGAAAGTTAACTGCAGAGAAGGAAGATCCTAGAAACCGCATGCTTCTCCAGAAACGACAATTCTATCACTCTCATAGGGTTCAGCCTATGGCATTAGACCAAGTCCTATCAGACAGGGATAGTGAGGATGAAGTTGATGATGACATTGCTGACTTTGAAGATCGAAGGATGCTTGATGATTTCGTGGATGTTACTAAAAGTGAAAAGAAGCTCATGCATCTTTGGAACTCATTCGTTAGGAAGCAAAGAGTATTAGCGGATGGTCATGTTGCATGGGCATGCGAGGCGTTTTCAAAGCTTCATGGGCAAGAGCTGGTCTCATCTCCCCCGCTCTTTTGGTGTTGGAGGTTATTCATGATCAAACTTTGGAATCATGGTCTTCTTGATGCCGGAGCGATGAATATTTGTAATGTAATTCTTGAGGGATACCGCGATCAAGGTTCCGATTCCACGAATGGTGGCCCAAGGGGATGA 1308 43.58 MCRQNSNVRAGEEATIAEENLLIYCKPVELYNILRCRSLHNPLFLQRSLHYKNQAKRKRRLRTGVVIFNYRDYNDTVQKSEVTDDFSCPFCLMRCASFKGLRYHLCASHDLFNFEFWVTEEYQAVNVSVKIDVLRSETVTDGLDPQVHTFSFCSKPRMRVSKNPVQNEKHLNVQFLELDSPMLAMEGIHKGFLGKEDDVLSCRSEKVSQLHPIENHVQNGKRERENYGPDYPSSSECMERVASSFNIAGISIAMTQSSTDPECAKSQSGSDPMQTAKVRKLTAEKEDPRNRMLLQKRQFYHSHRVQPMALDQVLSDRDSEDEVDDDIADFEDRRMLDDFVDVTKSEKKLMHLWNSFVRKQRVLADGHVAWACEAFSKLHGQELVSSPPLFWCWRLFMIKLWNHGLLDAGAMNICNVILEGYRDQGSDSTNGGPRG 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3100391 3104846 + Conep09aG0066900.1 Cone9ag0652 444815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0652 435 MobiDBLite consensus disorder prediction 257 275 - -
Cone9ag0652 435 Pfam VEFS-Box of polycomb protein 281 416 IPR019135 -
Cone9ag0652 435 CDD ZnB-Zn_EMF2-like 12 133 - -
Cone9ag0652 435 PANTHER POLYCOMB GROUP PROTEIN 7 59 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
Cone9ag0652 435 MobiDBLite consensus disorder prediction 257 276 - -
Cone9ag0652 435 CDD VEFS-box_EMF2-like 294 421 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0889 Cone-Chr15:6874558 Cone9ag0652 Cone-Chr9:3100391 8.21E-130 transposed
Cone6ag0647 Cone-Chr6:3271270 Cone9ag0652 Cone-Chr9:3100391 3.94E-291 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0652 - - - 0.0