Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone9ag0749 | ATGGAGATTTTCAACCAACTATCCTACCCGTTTCCAGTCGGGTCCTCATCCACATCCATTTTCGAATCATCCTCAATATCCTATGCTACTACGAGCACCATCGCCGCCGCTGCAGCTACCCGTAGATCATCCCATTCCGATGAGGAGGTTATACTAGCATCTAGCCGGCCGAAAAGGCGCTCAGGGAGGAGGGTGTTCAAGGAGACAAGGCATCCAGTTTACAGAGGTGTCAGGAGAAGGAAAAACAACAAATGGGTTTGTGAATTACGAGAACCGAACAAGAAGACTCGGATTTGGCTCGGGACTTACCCAAATGCTGAGATGGCGGCTCGGGCACATGACGTGGCGGCATTGGCTTTTCGGGGAAAGTTGGCTTGTCTTAATTTTGCGGCCTCAGCTTGGAAATTGCAACTCCCGGTGTCTACGGATGCTAAGGATATTAGGGTGGCGGCTGCTAAGGCGGCAGAGGAGTTTCGTGATGAGGAAATTGGTGGCGATGACATGACGGAGACAGTTATGGATGAGGGGGAAAATTCAGGTTCAGGTGATGGGTTCTGGTATTTGGATGAAGAGGCTGTGTTTGATATGCCAAGGTTACTATCCAGCATGGCAGAAGGGCTGCTGCTTTCTCCACCATGTTTTAGTGCGGAGGAAAACTTCAATTCAGATGATGTGGAAAATGATGCTGACGTGTCACTGTGGAGCTTCTCTATTTGA | 717 | 49.51 | MEIFNQLSYPFPVGSSSTSIFESSSISYATTSTIAAAAATRRSSHSDEEVILASSRPKRRSGRRVFKETRHPVYRGVRRRKNNKWVCELREPNKKTRIWLGTYPNAEMAARAHDVAALAFRGKLACLNFAASAWKLQLPVSTDAKDIRVAAAKAAEEFRDEEIGGDDMTETVMDEGENSGSGDGFWYLDEEAVFDMPRLLSSMAEGLLLSPPCFSAEENFNSDDVENDADVSLWSFSI | 238 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3572793 | 3573793 | - | Conep09aG0076600.1 | Cone9ag0749 | 444912 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone9ag0749 | 238 | PRINTS | Ethylene responsive element binding protein signature | 74 | 85 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag0749 | 238 | PRINTS | Ethylene responsive element binding protein signature | 96 | 112 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag0749 | 238 | Pfam | AP2 domain | 72 | 122 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag0749 | 238 | SMART | rav1_2 | 73 | 136 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag0749 | 238 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D | 32 | 236 | IPR045277 | GO:0003700(InterPro) | |
Cone9ag0749 | 238 | Gene3D | AP2/ERF domain | 73 | 131 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag0749 | 238 | CDD | AP2 | 74 | 132 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag0749 | 238 | FunFam | Ethylene-responsive transcription factor 2 | 72 | 131 | - | - | |
Cone9ag0749 | 238 | ProSiteProfiles | AP2/ERF domain profile. | 73 | 130 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone9ag0749 | 238 | SUPERFAMILY | DNA-binding domain | 73 | 131 | IPR016177 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone9ag0662 | Cone-Chr9:3150302 | Cone9ag0749 | Cone-Chr9:3572793 | 7.66E-23 | dispersed | |
Cone9ag0749 | Cone-Chr9:3572793 | Cone7ag1360 | Cone-Chr7:9870629 | 1.06E-14 | dispersed | |
Cone9ag0749 | Cone-Chr9:3572793 | Cone9ag0750 | Cone-Chr9:3581215 | 9.10E-120 | tandem | |
Cone14ag0113 | Cone-Chr14:525640 | Cone9ag0749 | Cone-Chr9:3572793 | 4.74E-72 | wgd | |
Cone15ag0118 | Cone-Chr15:569337 | Cone9ag0749 | Cone-Chr9:3572793 | 1.15E-70 | wgd | |
Cone6ag0745 | Cone-Chr6:3780101 | Cone9ag0749 | Cone-Chr9:3572793 | 1.64E-105 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46829 | PF12796 | Ank_2 | 2.00E-15 | CL0465 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone9ag0749 | - | - | - | 0.0 |