Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0750 ATGGAGATTTTCAACCAATCATCCGACCCGTTCCCAGTTGGGTTTTCATCCGAACCCATATTCTACGCTACTAGGAGCATCATCGCCGCCGCTGCAGCTAGCCGGAGATCATCCAATTCCGACGAGGATGTTATACTAGCATCTAGCCGGCCGAAAAAGCGAGCAGGGAGGAGAGTGTTCAAGGAGACAAGGCACCCAGTTTATAGAGGTGTCAGGAGAAGGAACAACAACAAATGGGTTTGCGAATTACGAGAACCGAACAAGAAGACTCGGATTTGGCTCGGTACTTACCCGAATGCTGAGATGGCGGCTCGGGCACATGACGTGGCGGCGCTGGCTTTTCGAGGGAAGTTGGCTTGTCTGAATTTTGCTGACTCAGTTTGGAAGCTGCCACTCCCGGTCTCTATGGATGCTAAGGATATTAGGGTGGCGGCTGCTAAGGCGGCAGAGGAGTTTCGGGATGAGGAAGTTGGTGGTAATGATGTGGCGGAGAGAGTTGTGGATGAGGGGGAAAATTCAGGTTCAGGTGATGGGTTCCGGTATTTGGAAGAAGAGGCTGTGTTTGATATGCCAAGGTTGCTTTCCAGCATGGCAGAAGGGCTACTGCTTTCTCCACCATGTTTTAGTACGGATGAAAGCTTAAATTCGGATGATGCGGAAAATGATGCGGACGTGTCACTTTGGAGCTTCTCTACTTGA 699 50.64 MEIFNQSSDPFPVGFSSEPIFYATRSIIAAAAASRRSSNSDEDVILASSRPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCELREPNKKTRIWLGTYPNAEMAARAHDVAALAFRGKLACLNFADSVWKLPLPVSMDAKDIRVAAAKAAEEFRDEEVGGNDVAERVVDEGENSGSGDGFRYLEEEAVFDMPRLLSSMAEGLLLSPPCFSTDESLNSDDAENDADVSLWSFST 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3581215 3581913 - Conep09aG0076700.1 Cone9ag0750 444913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0750 232 SMART rav1_2 67 130 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone9ag0750 232 FunFam Ethylene-responsive transcription factor 2 66 125 - -
Cone9ag0750 232 ProSiteProfiles AP2/ERF domain profile. 67 124 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone9ag0750 232 SUPERFAMILY DNA-binding domain 67 126 IPR016177 GO:0003677(InterPro)
Cone9ag0750 232 PRINTS Ethylene responsive element binding protein signature 90 106 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone9ag0750 232 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone9ag0750 232 CDD AP2 68 126 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone9ag0750 232 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 32 230 IPR045277 GO:0003700(InterPro)
Cone9ag0750 232 Pfam AP2 domain 66 116 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone9ag0750 232 Gene3D AP2/ERF domain 67 125 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0745 Cone-Chr6:3780101 Cone9ag0750 Cone-Chr9:3581215 2.22E-111 dispersed
Cone6ag0746 Cone-Chr6:3787184 Cone9ag0750 Cone-Chr9:3581215 3.94E-116 dispersed
Cone6ag0747 Cone-Chr6:3789018 Cone9ag0750 Cone-Chr9:3581215 3.67E-26 dispersed
Cone9ag0663 Cone-Chr9:3151746 Cone9ag0750 Cone-Chr9:3581215 7.08E-21 dispersed
Cone9ag0750 Cone-Chr9:3581215 Cone4ag0835 Cone-Chr4:5408866 3.41E-16 dispersed
Cone9ag0749 Cone-Chr9:3572793 Cone9ag0750 Cone-Chr9:3581215 9.10E-120 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46830 PF00201 UDPGT 7.90E-15 CL0113 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0750 - - - 0.0