Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone9ag0760 | ATGGCCTCTACAAGGTCGCTGAATCGATCGTCTGAAGACATTACCAATACAACGACGCCGCTGTTAGGGACTTCAAGTGGCTCTTCCGATGAAACTAGTTCAGGCCGTCGATTCGTTCAGAGGCAGAGCCTCCGTCAGGCCGCGCGGTTCCTTAGGCAAGCGAGCAGCCGGAGGATGATGCGTGAGCCGTCGATGGTGGTGAGAGAGGCTGCGGCGGAGCAATTAGAGGAGAGGCAGAGCGATTGGGCGTATTCCAAGCCTGTTGTGATTCTCGATATCGTTTGGAACTTCGCGTTTGTGGTTGTGGCAGCTACCGTGTTGGTTCTGAGTCGCAATGAGTCGCCGGATATGCCGTTGAGGCTTTGGATTCTGGGATACGCTCTACAGTGTATTCTTCATATGGTTTGTGTTTGTGTTGAGTATCGCCGGCGGCACCACCGTGGTCCCACGTTCAATTCGCCGGAGGGAGGAAATGAGGCAGGTAGGAATTCAGGTGTGGGCTCGAATGAAGACCCGGGGCAGTATGTATCATTGGGACAATTGGATGAGGAGGGGGCGAATGGCAGTGTGGCTAAGCATCTTGAATCTGCAAACACAATGTTTTCTTTTATCTGGTGGATCATCGGATTCTACTGGGTATCTGCCGGAGGTGAATCCTTAGGACTCACCTCCCCGCAGCTCTACTGGCTATGTATAATTTTCCTTGGTTTTGATGTTTTCTTTGTCGTCTTCTGTGTTGCCCTGGCATGTATCATTGGCATAGCTGTTTGCTGTTGCCTTCCTTGTATAATTGCACTTCTATATGCTGTAGCTGATCAGGAAGGAGCGTCCAAAGAAGAAATTGAACAGCTGTCAAAATATAAGTTTAGAAAAGTGGGCGATTCTGAGAAGGTTTCAAGTGATGATCAAGAACCTGCAGGAGGAATAATGACTGAATGTGGTGGCAACAAGGATTCGTTCACTGAACATGTCCTCTCTCAGGATGATGCTGAATGCTGTATATGCCTTTCTGCTTATGATGATGGAGTTGAGCTACGACAGCTACCTTGTGGTCATCATTTTCATTGCACTTGTGTTGACAAGTGGCTCTACATTAATGCGACCTGCCCTCTCTGCAAGTACAACATTTTAAAGAGCAGCAACCATGGTCAAGAGGAAGTTTAA | 1164 | 48.54 | MASTRSLNRSSEDITNTTTPLLGTSSGSSDETSSGRRFVQRQSLRQAARFLRQASSRRMMREPSMVVREAAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPDMPLRLWILGYALQCILHMVCVCVEYRRRHHRGPTFNSPEGGNEAGRNSGVGSNEDPGQYVSLGQLDEEGANGSVAKHLESANTMFSFIWWIIGFYWVSAGGESLGLTSPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKEEIEQLSKYKFRKVGDSEKVSSDDQEPAGGIMTECGGNKDSFTEHVLSQDDAECCICLSAYDDGVELRQLPCGHHFHCTCVDKWLYINATCPLCKYNILKSSNHGQEEV | 387 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3637166 | 3639726 | + | Conep09aG0077700.1 | Cone9ag0760 | 444923 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone9ag0760 | 387 | CDD | RING-H2_RNF6-like | 331 | 373 | - | - | |
Cone9ag0760 | 387 | ProSiteProfiles | Zinc finger RING-type profile. | 332 | 373 | IPR001841 | - | |
Cone9ag0760 | 387 | SUPERFAMILY | RING/U-box | 322 | 379 | - | - | |
Cone9ag0760 | 387 | SMART | ring_2 | 332 | 372 | IPR001841 | - | |
Cone9ag0760 | 387 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 315 | 382 | IPR013083 | - | |
Cone9ag0760 | 387 | PANTHER | TARGET OF ERK KINASE MPK-1 | 44 | 377 | - | GO:0000325(PANTHER)|GO:0006511(PANTHER)|GO:0016567(PANTHER)|GO:0061630(PANTHER) | |
Cone9ag0760 | 387 | FunFam | E3 ubiquitin-protein ligase At1g12760 | 318 | 383 | - | - | |
Cone9ag0760 | 387 | Pfam | Ring finger domain | 331 | 373 | IPR001841 | - | |
Cone9ag0760 | 387 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone19ag0731 | Cone-Chr19:6018946 | Cone9ag0760 | Cone-Chr9:3637166 | 9.46E-118 | dispersed | |
Cone7ag1732 | Cone-Chr7:11469243 | Cone9ag0760 | Cone-Chr9:3637166 | 2.99E-42 | dispersed | |
Cone8ag0244 | Cone-Chr8:1399617 | Cone9ag0760 | Cone-Chr9:3637166 | 2.29E-09 | dispersed | |
Cone9ag0760 | Cone-Chr9:3637166 | Cone9ag0888 | Cone-Chr9:4333137 | 3.99E-10 | dispersed | |
Cone11ag0409 | Cone-Chr11:2027383 | Cone9ag0760 | Cone-Chr9:3637166 | 1.42E-25 | wgd | |
Cone18ag1101 | Cone-Chr18:8039895 | Cone9ag0760 | Cone-Chr9:3637166 | 3.12E-151 | wgd | |
Cone6ag0756 | Cone-Chr6:3844159 | Cone9ag0760 | Cone-Chr9:3637166 | 5.65E-258 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone9ag0760 | - | - | - | 0.0 |