Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone9ag0798 | ATGGTTAATGATCATGATCACCATCATAACTGGCAAGAGAGCCGATTCGTTGACTTCTACGCTTCTTCTTCTTCATCATCATCTTCATCATCATCTTCTTCTTTGAGATCATCTACTGTTCTTCCTCCAAGTCAAGGTCTTTCACTATCTCTTTCTTCAACAAACCCTTCCACTAGTACTACTTTTGGATTACAGACCTCCTTTGAACAGGTCAGTGATCAAGTTCTACAAAATCATGAGGATATGATCAAGCTCTTTGATCAAGAGCACGAGCAAGAGGATCATTTGAATATTTCACAAGATGGGTACTTGGGAAAATTTGAAAGTCTTCTCCATCAGCAACAAGTTGAGTTTTATTTACAGGTGAAGAACTGTAAGTACTTAAACGCAGCTCAGGACCTTCTCAACGAGTTCTGTAGCCTCAGTACACAGCCAGATGGTCAAGTACAAAACTTGCGTAGTACCAACCTGGAAGAGGAAAATCATCATGACGTGATGTGTACAAGTACTACTACTTCCTCAAGAATATCGAAGCAAACATTCAATTCCCTTGATTTCATTGAATTGCAGAAGAGAAGAAGATCCAATCTCTATTATCTACTAGAAGAGACTGAAAGAAGATACAAGCACTACGGCAACCAAATGAAAGCGACGGTGTCATCGTTTGAGGCGTTGGCCGGAAACGGGGCGGCGGCAGTGTACTCGGAGTTGGCCTCAAAGGCGATGTCGAGGCGTTTCAGGTGTCTAAAAGATGGGATATTGAGTCAAATTCAGTCAACAAGAAAGGCAAGGGGAGAAAAAGACCAGATTACCCCTGGCACTACCAATGGCGAGACTCCGAGGCTTAGAGTTCTTGATCTGGCTTTGAGGCAACAAAAAGCTTTCCAGCAATTTGGTTTGATGGAGAGCCATCCATGGAGGCCTCAACGCGGCCTTCCCGAACGATCTGTTTCCGTTCTCCGAGCTTGGCTTTTCGAACACTTTCTTCACCCGTATCCAAGCGATGTTGATAAACATATATTAGCCCGCCAAACCGGTCTTACAAGAAGCCAGGTGTCAAATTGGTTCATAAATGCAAGGGTGAGGCTGTGGAAGCCGATGGTGGAAGAAATGTACATGGAAGAAACAAAAGCTGGAAGAAGACAATATTCCCGACAAAAACAAAAACACAAGCAAAAACAACATCATGGTCATGCCATCCTCAGATGA | 1209 | 43.34 | MVNDHDHHHNWQESRFVDFYASSSSSSSSSSSSSLRSSTVLPPSQGLSLSLSSTNPSTSTTFGLQTSFEQVSDQVLQNHEDMIKLFDQEHEQEDHLNISQDGYLGKFESLLHQQQVEFYLQVKNCKYLNAAQDLLNEFCSLSTQPDGQVQNLRSTNLEEENHHDVMCTSTTTSSRISKQTFNSLDFIELQKRRRSNLYYLLEETERRYKHYGNQMKATVSSFEALAGNGAAAVYSELASKAMSRRFRCLKDGILSQIQSTRKARGEKDQITPGTTNGETPRLRVLDLALRQQKAFQQFGLMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLTRSQVSNWFINARVRLWKPMVEEMYMEETKAGRRQYSRQKQKHKQKQHHGHAILR | 402 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3829853 | 3832011 | + | Conep09aG0081600.1 | Cone9ag0798 | 444961 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone9ag0798 | 402 | MobiDBLite | consensus disorder prediction | 260 | 279 | - | - | |
Cone9ag0798 | 402 | FunFam | BEL1-like homeodomain protein 4 | 309 | 371 | - | - | |
Cone9ag0798 | 402 | MobiDBLite | consensus disorder prediction | 379 | 402 | - | - | |
Cone9ag0798 | 402 | Coils | Coil | 373 | 393 | - | - | |
Cone9ag0798 | 402 | SUPERFAMILY | Homeodomain-like | 307 | 374 | IPR009057 | - | |
Cone9ag0798 | 402 | Pfam | Associated with HOX | 122 | 253 | IPR006563 | - | |
Cone9ag0798 | 402 | MobiDBLite | consensus disorder prediction | 383 | 402 | - | - | |
Cone9ag0798 | 402 | SMART | HOX_1 | 306 | 370 | IPR001356 | GO:0003677(InterPro) | |
Cone9ag0798 | 402 | ProSiteProfiles | 'Homeobox' domain profile. | 303 | 366 | IPR001356 | GO:0003677(InterPro) | |
Cone9ag0798 | 402 | Pfam | Homeobox KN domain | 323 | 362 | IPR008422 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Cone9ag0798 | 402 | SMART | prehox3 | 116 | 255 | IPR006563 | - | |
Cone9ag0798 | 402 | CDD | homeodomain | 306 | 367 | IPR001356 | GO:0003677(InterPro) | |
Cone9ag0798 | 402 | Gene3D | - | 301 | 381 | - | - | |
Cone9ag0798 | 402 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 55 | 393 | IPR050224 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone8ag1218 | Cone-Chr8:10314758 | Cone9ag0798 | Cone-Chr9:3829853 | 1.08E-68 | dispersed | |
Cone9ag0798 | Cone-Chr9:3829853 | Cone9ag1286 | Cone-Chr9:9611690 | 1.10E-63 | dispersed | |
Cone12ag0290 | Cone-Chr12:1567141 | Cone9ag0798 | Cone-Chr9:3829853 | 4.28E-111 | wgd | |
Cone6ag0798 | Cone-Chr6:4056769 | Cone9ag0798 | Cone-Chr9:3829853 | 2.15E-198 | wgd | |
Cone8ag0284 | Cone-Chr8:1635714 | Cone9ag0798 | Cone-Chr9:3829853 | 6.18E-114 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46834 | PF04116 | FA_hydroxylase | 4.60E-25 | No_clan | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone9ag0798 | - | - | - | 0.0 |