Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0801 ATGGCTGGTAAGGAATCGAGCTCTGCTGCTACAGGGGAGGGTAAGATCAAAGGGGTGCTGACACATGGCGGTAAATATGTGCAGTATAATGTGCATGGGAACTTGTTTGAGGTTTCTGTTAAGTATATTCCTCCCATCCGACCCATTGGTAGAGGTGCTTGTGGCCTCGTCTGTGCTGCGATTAATTCAGACACCCATGAGGCAGTCGCCATTAAGAAGATCGGTAACGCATTTGACAATGTAATCGATGCCAAAAGAACATTAAGAGAAATCAAACTTCTTCTTCACATGGATCACGAAAATATTATTGCCATCAGGGACATTATTCGACCTCCCAAAAAAGAAACCTTCAATGATGTGTACATTGTTTACGAGTTGATGGATACTGATCTTCACCAGATCATTCATTCCGACCAATCACTGACCGATCATCACTGTCAGTACATATTGTACCAGCTGTTACGAGGGCTAAAATACGTACACTCCTCCAAGGTCTTGCACCGTGATCTCAAGCCTAGCAACTTGTTCCTAAACGCTAGTTGTGACCTCAAAATCGGAGACTTTGGATTGGCAAGGACTACCTCAGAAACTGATTTCATGACCGAATATGTAGTCACTCGTTGGTACCGGGCCCCAGAATTGCTCCTCAATTGTTCAGAATACACTGCTGCTATTGATGTCTGGTCTGTTGGTTGTATTCTTGGCGAAATAGGTACAAGAGAACCCTTGTTCCCTGGAAAAGACTATGTTCATCAACTCAGGCTCATTACGGAGTTACTTGGTTCACCTGATGATGCAAGCCTCGGATTTCTCCGAAGCGATAATGCTCGAAGGCATGTTAAGCAGTTTCCCCAGTTCAGGAAGCAACAATTTCCGGCTAGGTTTCCAAACATGTCACCTGGGGCTGTTGATCTGTTAGAGAAAATGCTCGTATTTGATCCCAACAAACGGATTACAGTTGAAGAAGCGCTTTGCCACCCTTACTTTTTGTCCCTTCATGATATGAGCGATGAGCCAAGCTGCCCAAGGCCCTTCAATTTTGATTTTGAGCAACCATCTTGCACTGAAGAGCACATTAAAGAGCTCATATGGAGGGAATCTGTGAGGTTTAATCCCGACCCAACTCACTAA 1131 44.56 MAGKESSSAATGEGKIKGVLTHGGKYVQYNVHGNLFEVSVKYIPPIRPIGRGACGLVCAAINSDTHEAVAIKKIGNAFDNVIDAKRTLREIKLLLHMDHENIIAIRDIIRPPKKETFNDVYIVYELMDTDLHQIIHSDQSLTDHHCQYILYQLLRGLKYVHSSKVLHRDLKPSNLFLNASCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDVWSVGCILGEIGTREPLFPGKDYVHQLRLITELLGSPDDASLGFLRSDNARRHVKQFPQFRKQQFPARFPNMSPGAVDLLEKMLVFDPNKRITVEEALCHPYFLSLHDMSDEPSCPRPFNFDFEQPSCTEEHIKELIWRESVRFNPDPTH 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3846444 3848463 - Conep09aG0081900.1 Cone9ag0801 444964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0801 376 Gene3D Transferase(Phosphotransferase) domain 1 127 356 - -
Cone9ag0801 376 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 36 365 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cone9ag0801 376 Gene3D Phosphorylase Kinase; domain 1 26 366 - -
Cone9ag0801 376 FunFam Mitogen-activated protein kinase 127 356 - -
Cone9ag0801 376 ProSiteProfiles Protein kinase domain profile. 43 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag0801 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone9ag0801 376 Pfam Protein kinase domain 47 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag0801 376 SUPERFAMILY Protein kinase-like (PK-like) 46 337 IPR011009 -
Cone9ag0801 376 ProSitePatterns MAP kinase signature. 78 181 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag0801 376 CDD STKc_TEY_MAPK 36 372 - -
Cone9ag0801 376 FunFam Mitogen-activated protein kinase 28 138 - -
Cone9ag0801 376 SMART serkin_6 43 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone8ag0764 Cone-Chr8:7689117 Cone9ag0801 Cone-Chr9:3846444 6.41E-192 dispersed
Cone8ag1572 Cone-Chr8:11722153 Cone9ag0801 Cone-Chr9:3846444 5.18E-73 dispersed
Cone9ag0801 Cone-Chr9:3846444 Cone1ag1406 Cone-Chr1:56782156 1.32E-57 dispersed
Cone12ag0287 Cone-Chr12:1551932 Cone9ag0801 Cone-Chr9:3846444 2.38E-215 wgd
Cone14ag0377 Cone-Chr14:1764585 Cone9ag0801 Cone-Chr9:3846444 2.40E-229 wgd
Cone15ag0414 Cone-Chr15:1946029 Cone9ag0801 Cone-Chr9:3846444 2.59E-146 wgd
Cone6ag0803 Cone-Chr6:4083500 Cone9ag0801 Cone-Chr9:3846444 1.45E-278 wgd
Cone8ag0281 Cone-Chr8:1625057 Cone9ag0801 Cone-Chr9:3846444 2.43E-245 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83176 PF13419 HAD_2 5.30E-15 CL0137 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0801 K20600 - csv:101214254 683.715