Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone9ag0811 | ATGGAAGGCTCCTCATGGGATTTGCAAGCTATAGTAAGAGGATCATACACCAATGAAACTGATCATGATCCAATAATTACTGATGATATAATCAAAATGGAATCACCGCAGTTACCGGCGTCCACCTTTGATCAATACCCTAATTTGGTCGGTACTGTTCTTGATCATGATGAAGATGTACCTTTTCCAGATTTCTTTGAAACCACCACAACAAGTTTAGATGAATTGGAAGGGCTTTACAAGCCTTTCTACCCGGTCTTTTCCTCTCAGACCGTCCGTTTTACAGACCCCTCAGCCTCGATTTCTGTTCCAAGAGAATTAGTCAAAGAACTAGATGATCATCCTCAAAAGCAGGCACAGCACCACAAAAACCATCAAACCTCATCATCTGTTAAGACTAAAACAAGCAAGAAGAATCAACAAAATAGGGTGATAAAACAGGTAAAAGCAGATGGGCTGAGCTCAGACATGTGGGCATGGAGGAAATATGGGCAGAAACCAATAAAGGGATCGCCATATCCGAGAAGCTATTATAGATGTAGTAGCTCAAAGGGATGTTCAGCAAGAAAGCAAGTAGAACAAAGCCCTTCCGATCCAGACATTTTCATCATAACCTACATGTCGGAACACGACCATGCCCTCCCGACTCGCCTGAACTCACTTTCCGGAATCAGCAAGAGCAAGTACTACTCACACAAACGGAAAATCACTACTTGTGATCCCGATCAGGCCGTAAATAGTAATATTGGTTCGCCGGATCCCGATACTTATAAGGTTATGTCTCCTACTACATCTCAATCTGTAGTAACTTATGAAGATCATGATCTTGGGCATGTTAACAACATTTGCGTAAGAAAGGAAGAAGAATATCATGATCAGGCAGTGTTCTTGGAACAAAGTGAAGGCAATTATAATTACGACCAATGTGTGATGGTTAGTTCCGATAATCGTGATCATGATCAGATCATTTCAAGTGACGATTTGTTTCCAATCCTGGAAGAGATACTTTTTGGATAA | 1017 | 41.2 | MEGSSWDLQAIVRGSYTNETDHDPIITDDIIKMESPQLPASTFDQYPNLVGTVLDHDEDVPFPDFFETTTTSLDELEGLYKPFYPVFSSQTVRFTDPSASISVPRELVKELDDHPQKQAQHHKNHQTSSSVKTKTSKKNQQNRVIKQVKADGLSSDMWAWRKYGQKPIKGSPYPRSYYRCSSSKGCSARKQVEQSPSDPDIFIITYMSEHDHALPTRLNSLSGISKSKYYSHKRKITTCDPDQAVNSNIGSPDPDTYKVMSPTTSQSVVTYEDHDLGHVNNICVRKEEEYHDQAVFLEQSEGNYNYDQCVMVSSDNRDHDQIISSDDLFPILEEILFG | 338 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3902804 | 3904063 | + | Conep09aG0082900.1 | Cone9ag0811 | 444974 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone9ag0811 | 338 | MobiDBLite | consensus disorder prediction | 112 | 142 | - | - | |
Cone9ag0811 | 338 | Pfam | WRKY DNA -binding domain | 156 | 212 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone9ag0811 | 338 | MobiDBLite | consensus disorder prediction | 122 | 142 | - | - | |
Cone9ag0811 | 338 | FunFam | WRKY transcription factor 22 | 137 | 208 | - | - | |
Cone9ag0811 | 338 | Gene3D | WRKY domain | 137 | 208 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone9ag0811 | 338 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 112 | 324 | IPR044810 | GO:0000976(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cone9ag0811 | 338 | ProSiteProfiles | WRKY domain profile. | 149 | 215 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone9ag0811 | 338 | SUPERFAMILY | WRKY DNA-binding domain | 152 | 215 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone9ag0811 | 338 | SMART | WRKY_cls | 154 | 214 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone9ag0811 | Cone-Chr9:3902804 | Cone9ag1134 | Cone-Chr9:7884428 | 1.44E-31 | dispersed | |
Cone11ag0447 | Cone-Chr11:2253478 | Cone9ag0811 | Cone-Chr9:3902804 | 3.39E-38 | wgd | |
Cone14ag0387 | Cone-Chr14:1810039 | Cone9ag0811 | Cone-Chr9:3902804 | 2.97E-41 | wgd | |
Cone14ag0050 | Cone-Chr14:312009 | Cone9ag0811 | Cone-Chr9:3902804 | 2.88E-38 | wgd | |
Cone15ag0424 | Cone-Chr15:2001244 | Cone9ag0811 | Cone-Chr9:3902804 | 1.21E-37 | wgd | |
Cone15ag0055 | Cone-Chr15:335860 | Cone9ag0811 | Cone-Chr9:3902804 | 4.95E-39 | wgd | |
Cone18ag1061 | Cone-Chr18:7777622 | Cone9ag0811 | Cone-Chr9:3902804 | 4.63E-39 | wgd | |
Cone6ag0812 | Cone-Chr6:4127490 | Cone9ag0811 | Cone-Chr9:3902804 | 3.99E-193 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46835 | None | None | None | None | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone9ag0811 | K13426 | - | mdm:103439197 | 199.134 |