Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0825 ATGGTTTCAAATACAACAGCAGCAGCAGCACACATTTGTGTCCCTCCAATGAAAGTCACCTCAAACGGCATATTCCAGGGCGATAATCCTCTAGATTCTGCTCTCCCTCTCCTCATCTTACAGGTCGTTTTAGTTGTTACACTCACCAGATGCCTCGCCTTTCTCTTGAAGCCATTGAGACAGCCCCGTGTCATTGCAGAGATTATAGGAGGAATCCTACTCGGCCCATCCGCTCTAGGACGAAACAAAACCTACATAAACACAATCTTTCCGTCAAAAAGCCTCTTAGTATTAGACACGGTAGCAAACATTGGTCTATTGCTATTTCTATTCCTAGTGGGCCTTGAACTGGACCCAAAATCGATCCGTAAAACCGGAAAGAAAGCATTAGCCATTGCAATAGCCGGGATCAGCCTTCCTTTCGCGCTAGGGATCGGCACCTCCTATATCCTCCGAGCAACCATCTCTAAAGGTGTGGATAGCATCGCATTCCTGGTGTTTATGGGAGTAGCCCTTTCCATAACCGCCTTCCCTGTCTTGGCTCGTATTCTAGCCGAGCTCAAGCTATTAACAACTAACATAGGAAGACTTGCCATGTCAGCAGCAGCGGTTAATGATGTTGCTGCTTGGATTCTTCTTGCTTTAGCAATCGCTTTGTCTGGTTCCGGACAATCTCCTTTAGTTGCTGTCTGGGCTCTTTTTTCTGGGTGCGGTTTTATCATCTGTTCGATTCTTTTAATATCTCCCATCCTTAAATGGATGGCCAAACAGTGTCCAGAAGGAGAGCCGGTGAAAGAGATTTATGTCTGTGCGACTCTTGTTATTGTTCTTGCAGCCGGATTTGTTACAGATGCGATTGGAATCCATGCCATGTTTGGAGCTTTTGTGGTTGGAATTTTGGTTCCAAAAGATGGACCGTTTAGAAGCGTTTTAGTTGAGAAAGTGGAGGATCTAGTTTCGGGTATTTTTCTGCCATTGTATTTTGTTTCAAGTGGATTGAAGACCAATATAGCCACGATTCAAGGGGTCCGTTCTTGGGGTCTTTTAGGTTTAGTTATAGTAACGGCTTGTTTTGGGAAAATTGTTGGTAGTACGGCTGTTTCCTTGCTTTGCAAGATACCTTTTAGAGAAGCTCTCACCCTCGGGTTTTTGATGAATAGTAAAGGATTGGTCGAGGTCATTGTCCTTAACATTGGTAGAGACAGAAAGGTTTTGAATGATCAAACATTTGCAATTATGGTTCTCATGGCACTTTTTACAACCTTCATCACCACACCTCTTGTTGTTTTCTTCTACAAGCCGGGAAAAAGGGGATCTTTATTGGCTGGTTACAAGCACCGGAAAATTGAAAGGAAGAACCGGACAGACCCTGAGCTAAGAATCTTAACATGCTTCCATGGAGCAAGAAACATTCCGTCGCTGATTAACCTCCTAGAGGCCTCAAGAGGGACTGATAAGCGCAAAGGGCTTTGCGTCTATGCAATGCACCTCATGGAACTTTCCGAACGACCCTCTGCTATTCTAATGGTGCATAAGGCAAGAAAAAATGGTCGACCCTTCTGGAACAAAAGTCAAGGATCAGCCTCTGACCGAATGACTGTTGCTTTCGAGAGTTACGAGCAGTTAAGCCATGTTTCGATCCGTCCAATGACTGCAATCTCATCAATGTCTGATATACATGAAGATATTAACACGACTGCTGAGAGAAAGAGAGTGGCCATTATAATTCTCCCCTTCCATAAGCACCAGAAAATGGATGGTTCACTAGAGATTACTCAGAGTAGCTTCCGGATGGTCAACCAGAAGGTTCTAGAGAATGCTCCTTGTTCAGTTGGGATTCTTGTTGACCGCGGACTTGGCGGGACCACTCACATCTCGGCGGGTAATGTTTCTTATTTTGTTGTCGCACTTTTCTTTGGTGGTCGTGATGACAGAGAAGCACTTGCATATGCGGCCCGCATGGCAGAACACTCCGGGATTAAGTTAATGGCGATCCGTTTCTTACTGGACTTGGACAATATTGTGGAGGAGATAGCTGGAGATGAAGAGTTTCTTTTGGAGTTCAAGCAAGATGTGGCGAAGAAGAATCCCCTAATATATGAGGAGAAAGTTGTGAGACATGTAAAGGATATTACTTCGGCTGTTAGCGAAGTAAGCAATTGCAATTTGTTTCTCGTGGGCCGGGTTTCAAATGGTGTAACTAACTTATTAAGTTCGGTTAGAAGTGACTGCCCCGAGTTGGGGCCGGTTGGGAATTTGTTGACTTTACCAGAATATTCAGTTACAGCATCGGTTCTGGTGGTGCAGCAGTACTTTAGTGGGGGGATATCTCAAGTTTCGACTTCGTCTGTGGAGCAAAGCTTGGGCGACGGAATATCAGATTCTGCTTAA 2391 44.75 MVSNTTAAAAHICVPPMKVTSNGIFQGDNPLDSALPLLILQVVLVVTLTRCLAFLLKPLRQPRVIAEIIGGILLGPSALGRNKTYINTIFPSKSLLVLDTVANIGLLLFLFLVGLELDPKSIRKTGKKALAIAIAGISLPFALGIGTSYILRATISKGVDSIAFLVFMGVALSITAFPVLARILAELKLLTTNIGRLAMSAAAVNDVAAWILLALAIALSGSGQSPLVAVWALFSGCGFIICSILLISPILKWMAKQCPEGEPVKEIYVCATLVIVLAAGFVTDAIGIHAMFGAFVVGILVPKDGPFRSVLVEKVEDLVSGIFLPLYFVSSGLKTNIATIQGVRSWGLLGLVIVTACFGKIVGSTAVSLLCKIPFREALTLGFLMNSKGLVEVIVLNIGRDRKVLNDQTFAIMVLMALFTTFITTPLVVFFYKPGKRGSLLAGYKHRKIERKNRTDPELRILTCFHGARNIPSLINLLEASRGTDKRKGLCVYAMHLMELSERPSAILMVHKARKNGRPFWNKSQGSASDRMTVAFESYEQLSHVSIRPMTAISSMSDIHEDINTTAERKRVAIIILPFHKHQKMDGSLEITQSSFRMVNQKVLENAPCSVGILVDRGLGGTTHISAGNVSYFVVALFFGGRDDREALAYAARMAEHSGIKLMAIRFLLDLDNIVEEIAGDEEFLLEFKQDVAKKNPLIYEEKVVRHVKDITSAVSEVSNCNLFLVGRVSNGVTNLLSSVRSDCPELGPVGNLLTLPEYSVTASVLVVQQYFSGGISQVSTSSVEQSLGDGISDSA 796
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3996401 3999845 - Conep09aG0084300.1 Cone9ag0825 444988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0825 796 FunFam Cation/H(+) antiporter 15 37 439 - -
Cone9ag0825 796 PANTHER CATION/H + ANTIPORTER 12 776 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Cone9ag0825 796 Gene3D - 37 437 IPR038770 -
Cone9ag0825 796 Pfam Sodium/hydrogen exchanger family 47 427 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag1271 Cone-Chr6:10152369 Cone9ag0825 Cone-Chr9:3996401 6.67E-248 dispersed
Cone7ag0072 Cone-Chr7:306194 Cone9ag0825 Cone-Chr9:3996401 1.65E-109 dispersed
Cone7ag0073 Cone-Chr7:310621 Cone9ag0825 Cone-Chr9:3996401 1.49E-115 dispersed
Cone9ag0825 Cone-Chr9:3996401 Cone9ag0826 Cone-Chr9:4014052 0 tandem
Cone6ag0824 Cone-Chr6:4210873 Cone9ag0825 Cone-Chr9:3996401 7.00E-69 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0825 K26731 - mdm:114821014 1061.6