Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0826 ATGGCTGGGAATTCAACAGCAGTAGGTGCTTGTCCAGCACCCATGAAAGCTACATCAAACGGCGCGTTTCAAGGAGACAATCCCCTTGAGTATGCACTCCCTCTTGTCATCTTACAGATTTGCCTTGTCGTCGTCCTCACACGAGTTCTCGCTTTCTTTTTCCGACCACTGAGACAGCCTCGTGTCATTGCTGAGATTGTTGGAGGAATATTGCTAGGCCCCTCGGCTCTAGGCCGGAACAAAACCTTCCTAGACAACGTTTTCCCTTCAAGAAGTCTAACAGTACTAGACACTATAGCTAATCTGGGCCTCCTCTTCTTCCTCTTCCTAGTCGGGCTTGAACTGGACCTCAGTTCCCTCCGAAGAACAGGGAAAAAGGCCCTCAGCATAGCCGCAGCCGGAATCAGTCTCCCGTTCCTTACGGGAATCGGAACCTCTTACATTTTACGAGCAACGATTGCAAAAGGCATAGACAAAGCCCCATTCCTTGTCTTCATGGGTGTTGCTCTTTCCATAACTGCCTTCCCTGTCCTGGCCCGCATCTTAGCTGAGCTCAAGCTCCTAACAACCGACGTAGGCCGGATGGCCATGTCAGCAGCGGCGGTTAATGACGTGGCCGCTTGGATCCTACTTGCTCTGGCTATCGCCTTATCCGGGACGGACAGCTCTCCGCTAATTTCTCTCTGGGTCTTCTTGTCTGGAGCCGGATTCGTGACCGCTTGCTTCTTTGTTCTCCCCCCCATATTTAAATGGATGGCTCAACAGTGCCCGGAGGGTGAACCGGTCAAGGAGCTGTATGTCTGTACCATCTTGACCACGGTTCTGGCAGCTGGGTTCGCTACGGACTCGATTGGGATTCATGCGTTGTTTGGGGCTTTTGTGGTGGGGGTGCTTGTTCCGAAAGAAGGGCCATTTGCGGGAGCGTTGGTCGAGAAAGTTGAGGATCTTGTTTCAGGGCTTTTCCTTCCTTTGTACTTTGTTTCTAGCGGGCTTAAGACTGATGTGACCACCATTAAAGGGGCCCAATCTTGGGGTCTTCTTGTTCTCGTCATTGTTACAGCTTGTTTCGGGAAAATCGCCGGGACTGTCTCTGTTTCTCTTCTCTGTAAAGTGCCCTCTCAAGAGGCCGTTGCTCTTGGGTTTTTGATGAATACTAAAGGGTTGGTAGAACTCATTGTCCTCAACATTGGTAAAGACAGAAAGGTGTTGAATGATCAAACATTTGCAATTATGGTTTTGATGGCGATATTCACGACGTTCATCACAACACCTTTAGTGGTGGCTGTCTATAAGCCAGCTAGAAGAAGGAAAGAAGTGCCTGATTACAAGCGCAGAACGATCGAGCAGAGAGAATCTAATTCCCAGCTTCGTATCGTGGCATGTTTCCACACCATAAGAAACATCCCCACCATGGTCAACCTGATTGAAGCTTCTCGTGGGACAGAGAAGAAAGAAGGTCTATGTGTCTATGCAATGCACTTAATGGAGCTAACAGAAAGATCCTCTTCCATCTTAATGGTCCACAAGGCGAGAAAAAATGGACTTCCCTTTTGGAACAAACGACCCAGAGATGCTTCCGACCAATTTGTTGTTTGTTTTGAGGCCTTTTTACAGCTCAGCAGAGTTTCAATCCGACCAATGACGGCTATTTCATCGATGTCCGATATGCATGAAGATATCTGCAATAGTGCAGAGAGAAAAAGAGCTACTGTAATAATACTTCCGTTCCACAAACATCAGAGACTGGATGGGACTTTGGAAACTACTCGCACTGAGTTCCGTTTGGTCAACAAGAAGGTTCTAGAACATGCTAGATGTTCGGTCGGAATCTTGGTTGACCGTGGACTCGGAGGGGGGATCCATGTCTCCGCGAGCAATGTTTCTTCAACTGTAACCGTGTTGTTCTTTGGTGGAAGAGATGATAGGGAAGCGCTTGCTTACGGCGCAAGAATGGCAGAGCATCCAGGTATAAAACTGATCGTGGTTAGGTTCTTGACGGGCCCAGATAGTATATCGGGATCCGGAGAGATTGTGAAAGAGAATAGTAATTTGGATCAGGACAACAAGTTCTTGTCTGAATACAGGCAGGGGATTTCGAAGGACGACTCTGTTCAGTTCGAGGAGAGGAGGGTGAGCACCGGCACGGAAGTTGCTGAGGCTGTTAAGGAGTTTAGCAAGTGCAATTTGATATTGGCGGGAAGGATGCAGGAAGGTCAAGTGGTTGAAGAAATGATGAATAGTCATCATCATGTAAAGGGGGAGTGTCCTGAGCTGGGGCCCATAGGGAACCTGTTGACTTCTCATGATCTGGTGATTCCTGCATCTATATTGATCTTGCAACAGTTTCATTACCAGGAGATTCCGCGTTCTCTTTCCGGCTTGTCGAGGTCGGTTGTGTTGCCTAAGGACGATCTCGAAGCGAGCTTATGA 2430 48.35 MAGNSTAVGACPAPMKATSNGAFQGDNPLEYALPLVILQICLVVVLTRVLAFFFRPLRQPRVIAEIVGGILLGPSALGRNKTFLDNVFPSRSLTVLDTIANLGLLFFLFLVGLELDLSSLRRTGKKALSIAAAGISLPFLTGIGTSYILRATIAKGIDKAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGTDSSPLISLWVFLSGAGFVTACFFVLPPIFKWMAQQCPEGEPVKELYVCTILTTVLAAGFATDSIGIHALFGAFVVGVLVPKEGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTDVTTIKGAQSWGLLVLVIVTACFGKIAGTVSVSLLCKVPSQEAVALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMVLMAIFTTFITTPLVVAVYKPARRRKEVPDYKRRTIEQRESNSQLRIVACFHTIRNIPTMVNLIEASRGTEKKEGLCVYAMHLMELTERSSSILMVHKARKNGLPFWNKRPRDASDQFVVCFEAFLQLSRVSIRPMTAISSMSDMHEDICNSAERKRATVIILPFHKHQRLDGTLETTRTEFRLVNKKVLEHARCSVGILVDRGLGGGIHVSASNVSSTVTVLFFGGRDDREALAYGARMAEHPGIKLIVVRFLTGPDSISGSGEIVKENSNLDQDNKFLSEYRQGISKDDSVQFEERRVSTGTEVAEAVKEFSKCNLILAGRMQEGQVVEEMMNSHHHVKGECPELGPIGNLLTSHDLVIPASILILQQFHYQEIPRSLSGLSRSVVLPKDDLEASL 809
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4014052 4017700 + Conep09aG0084400.1 Cone9ag0826 444989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0826 809 Gene3D - 480 750 - -
Cone9ag0826 809 FunFam Cation/H(+) antiporter 15 35 437 - -
Cone9ag0826 809 Pfam Sodium/hydrogen exchanger family 46 425 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cone9ag0826 809 Gene3D - 35 439 IPR038770 -
Cone9ag0826 809 PANTHER CATION/H + ANTIPORTER 11 785 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0018 Cone-Chr12:165910 Cone9ag0826 Cone-Chr9:4014052 6.97E-244 dispersed
Cone14ag0671 Cone-Chr14:3458926 Cone9ag0826 Cone-Chr9:4014052 0 dispersed
Cone15ag0680 Cone-Chr15:3667298 Cone9ag0826 Cone-Chr9:4014052 1.90E-124 dispersed
Cone6ag0824 Cone-Chr6:4210873 Cone9ag0826 Cone-Chr9:4014052 4.75E-40 dispersed
Cone6ag0825 Cone-Chr6:4213906 Cone9ag0826 Cone-Chr9:4014052 0 dispersed
Cone8ag0012 Cone-Chr8:121980 Cone9ag0826 Cone-Chr9:4014052 4.31E-56 dispersed
Cone8ag0442 Cone-Chr8:2777021 Cone9ag0826 Cone-Chr9:4014052 7.94E-82 dispersed
Cone9ag0826 Cone-Chr9:4014052 Cone7ag0735 Cone-Chr7:4467331 8.86E-07 dispersed
Cone9ag0825 Cone-Chr9:3996401 Cone9ag0826 Cone-Chr9:4014052 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0826 K26731 - mdm:103447323 1100.5