Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0846 ATGGAAAGTTCCATCAGAGACAAATGTCCTGTAAAAATAGATATTGGGCCTGTATACACTGTAGATCCTTCAAAGAGGCACGCCTATGCCCAAAGTGGTGATAATGTTTTCACTCCAATGGAGAGAGAGCTAGTTTTTGATATAGATATAACCGATTATGATGATTTTAGATACTGCTGTTCCGGAGCTGATGTGTGCTTGGATTGCTGGCCACTAATGACTGCTGCTATCAAAGTGATTGATTCTGCCCTCAGAGATGACTTTGGACTCAATCACATACCATGGGTATTTAGTGGTAGACGTGGTGTTCATTGTTGGGTTTGTGCTGGGAGAGCAAGAAGGTTGACTAATGAACAGAGGGCTGCCATTGCTGATTATTTCCGCTTATATCAGGGAAATGAAAACAGTCAGAAGAAGATTTCTCTATCTGGTCCTGTTCTTCACCCATTCCTTTCGCGATCATATACTGAAGTCCTAAGAGAATATTTCGAGATGAAATTGCTTTCAAGCCAAAAGATCTTTTCAACCGAAGAGAGATATGAGAAGATGTTAGATATGATTCCTGATGAGTCCATTACATCTGAGCTGCGAGGAAGGTGGCAGGAAAATCGGGGATTGTCTATTTCAAAAGAAGGTATAAATTCTGTAAGATGGGAGCAGCTAAAACGTATGCTACAATCCACAAAACATAAGGTACAAAATACTCATCTTTTACCAGTGTATCTTTCAAAGTATGGAAAAGAGGAGATGAAGGTATAG 759 40.05 MESSIRDKCPVKIDIGPVYTVDPSKRHAYAQSGDNVFTPMERELVFDIDITDYDDFRYCCSGADVCLDCWPLMTAAIKVIDSALRDDFGLNHIPWVFSGRRGVHCWVCAGRARRLTNEQRAAIADYFRLYQGNENSQKKISLSGPVLHPFLSRSYTEVLREYFEMKLLSSQKIFSTEERYEKMLDMIPDESITSELRGRWQENRGLSISKEGINSVRWEQLKRMLQSTKHKVQNTHLLPVYLSKYGKEEMKV 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4135582 4137148 + Conep09aG0086600.1 Cone9ag0846 445009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0846 252 Pfam DNA primase small subunit 46 224 IPR002755 GO:0003896(InterPro)|GO:0006269(InterPro)
Cone9ag0846 252 PANTHER DNA PRIMASE SMALL SUBUNIT 1 234 - GO:0003896(PANTHER)|GO:0005658(PANTHER)|GO:0006269(PANTHER)
Cone9ag0846 252 SUPERFAMILY Prim-pol domain 2 225 - -
Cone9ag0846 252 Gene3D DNA primase, PRIM domain 1 249 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0848 Cone-Chr6:4327329 Cone9ag0846 Cone-Chr9:4135582 4.12E-168 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0846 K02684 - vvi:100260326 411.764