Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0849 ATGAGAAAACGAATCCTGGCAGTTGACGAAGGTGATGAAAGAGGAAAGAATCCCACAAACCTGAACGCAGCAGCGGCCGAACTGAAAGGAAATATAGAAAGAAAGGATCGTCGAAATTCATCGCAAAAAGCAATAGATAGCTGCTTCCCGCCACAGGAAATTGATCGACCTCGCTTCGAGGATCGGTGTATGATCAATCAGAGAAAGAGAGAAGTGTGCATCAATGATGCATCAACCTTACCAAGCCCTTCCATCAAAGAACCGAAGTTCAATGACAGCGTGAAGGAGCTGAGATCGGATCCATCTGCATCGGTTGCATCAACTAGCCACCCGCCAGAGGAAGTAGAAGAAGAAAGGCAAAAACCGACGCCGATTGTATTGCCAGTAGCAAGCGGTGAGGTGAAAGAGCAAGTGCAGATATCAAAATCATTATCTCACGGATCGATATCTTTAATCGGACGGAGGAGATCTATGGAGGATGCGGTTACAGTGATTCCAGGAATTTTGTCCACAGAGTTCAATTCGTACGATTCCTTTGCAGTGTACGATGGTCACGGTGGATCACTAGTTGCAAATGCATGCCGTGATAGGCTGCATCAACTGATAGCAAATGAGGTGGAAGGAACAACAGTTGGCGGAAATCGAGTGGACTGGGAGAAGGTGATGGCGGCGTGTTTTCTGAAAATGGATGAGGAGGTTAAAGTACGTGAGGATGTGGCAGAAGCAGTGGAAGCAACATCGATGGGATCCACCGCTTTGGTGGTTATGGTCGGGACGGATGAGCTGGTTGTGGCTAATTGCGGCGACTCCAGGGCGGTTCTCTGTCGAGACGGTCATTCCATTCCGTTAACACGTGATCACAAGCCTGATCTGCCTGATGAAAATGAAAGGGTGGAAACTGCAGGTGGAATGATCATAGATTGGGACGGTTTTCGTGTTCTCGGAGTCCTAGCTACGTCGAGATCGGTCGGGATTCAAAAATTGAAGCCATTTGTGAGCTCCGAACCAGAAGTTACAGTGAGCGAGCGAACGGAGCAGGACGAGTTTCTTATCATAGGCAGTGACGGTCTATGGGATGTTGTTTCAAGCGAATTTGCTTGTGAGGTTGTAAAGGGATGTCTTGACGGTCAGCTCAGCAGGAGGATGCTTTCTGAAGGGACGAACGGAAGCCGTGCTTCCATGGCGGCGGCAATTCTGGCAGAGGTAGCAATTGCCAAGGGGAGCAAAGATAATATCAGCGTTATAGTTGTTGAGCTCAGGAAGTGTAAATGA 1272 48.35 MRKRILAVDEGDERGKNPTNLNAAAAELKGNIERKDRRNSSQKAIDSCFPPQEIDRPRFEDRCMINQRKREVCINDASTLPSPSIKEPKFNDSVKELRSDPSASVASTSHPPEEVEEERQKPTPIVLPVASGEVKEQVQISKSLSHGSISLIGRRRSMEDAVTVIPGILSTEFNSYDSFAVYDGHGGSLVANACRDRLHQLIANEVEGTTVGGNRVDWEKVMAACFLKMDEEVKVREDVAEAVEATSMGSTALVVMVGTDELVVANCGDSRAVLCRDGHSIPLTRDHKPDLPDENERVETAGGMIIDWDGFRVLGVLATSRSVGIQKLKPFVSSEPEVTVSERTEQDEFLIIGSDGLWDVVSSEFACEVVKGCLDGQLSRRMLSEGTNGSRASMAAAILAEVAIAKGSKDNISVIVVELRKCK 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4151370 4152815 - Conep09aG0086900.1 Cone9ag0849 445012

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0849 423 MobiDBLite consensus disorder prediction 1 53 - -
Cone9ag0849 423 SMART PP2C_4 135 417 IPR001932 -
Cone9ag0849 423 SUPERFAMILY PP2C-like 140 420 IPR036457 -
Cone9ag0849 423 ProSiteProfiles PPM-type phosphatase domain profile. 145 419 IPR001932 -
Cone9ag0849 423 FunFam Protein phosphatase 2C 50 149 423 - -
Cone9ag0849 423 PANTHER PROTEIN PHOSPHATASE 114 418 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone9ag0849 423 MobiDBLite consensus disorder prediction 1 16 - -
Cone9ag0849 423 CDD PP2Cc 145 419 IPR001932 -
Cone9ag0849 423 Gene3D - 138 423 IPR036457 -
Cone9ag0849 423 Pfam Protein phosphatase 2C 147 412 IPR001932 -
Cone9ag0849 423 SMART PP2C_SIG_2 160 419 IPR001932 -
Cone9ag0849 423 MobiDBLite consensus disorder prediction 94 124 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0849 K14497 - - vvi:100251367 348.591
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0966 Cone-Chr1:54864311 Cone9ag0849 Cone-Chr9:4151370 2.35E-92 dispersed
Cone5ag0672 Cone-Chr5:2877495 Cone9ag0849 Cone-Chr9:4151370 2.34E-88 dispersed
Cone5ag0824 Cone-Chr5:3528752 Cone9ag0849 Cone-Chr9:4151370 2.94E-41 dispersed
Cone5ag1121 Cone-Chr5:4987859 Cone9ag0849 Cone-Chr9:4151370 1.54E-81 dispersed
Cone7ag1233 Cone-Chr7:9143732 Cone9ag0849 Cone-Chr9:4151370 2.73E-65 dispersed
Cone7ag1942 Cone-Chr7:12392172 Cone9ag0849 Cone-Chr9:4151370 2.66E-28 dispersed
Cone8ag1336 Cone-Chr8:10770928 Cone9ag0849 Cone-Chr9:4151370 1.01E-29 dispersed
Cone8ag1519 Cone-Chr8:11461738 Cone9ag0849 Cone-Chr9:4151370 7.79E-31 dispersed
Cone9ag0184 Cone-Chr9:805263 Cone9ag0849 Cone-Chr9:4151370 6.46E-33 dispersed
Cone12ag0252 Cone-Chr12:1340781 Cone9ag0849 Cone-Chr9:4151370 1.54E-06 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g129 . . . Bda08g00467 . . . Bma14g00520 . . . . . . . . . . . . . . . . . . . . . . . . . . Cone9ag0849 . . . . . . . . . Bpe11g00748 Bma05g00875 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006690 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 3 1 1 1 1 1 1 1 1 1 2 3 3 38