Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0855 ATGGATGATTGTCATGGGCCTCGAAATATAAATTTTATCCCAGATCATTTTCAAGCTACAACACCTGATTTGGGCTCTCCCCAAAGCAGCACTTCATCTCTTTCACAGCCTAGACTTGAGAATTCGTCAAGGTCCAATAATCTTTCGTGGTCTCAAAGAAAACTCAGAAGCACGACATTCAGGCTAAACATGTTCAGTCTACGACGATTGTCATGGGGTTCTAGCAGTGAAGGACAAGAAAAGGTTGTGCTAACAGCAGCAGAGGTAGAATCACTTCGTTCAGAGGTTAATGATTTGGAAGACAAGGAAGCTCACTTAAAAGCTCAGATAGAGCATATTCATGAAATTTTGCTATCTGCTCGTCTGTCAGGCTATTTATATATGCGGACTAGGTGGCCGGAGCTACCTGGAGAACCTCTCCCAGTCGATGATACCGATGTCGATGACTGGCTTCCTCGATTTGTTGTCCTTCAGGGACCTTGTATTTTCTACTACTTATTATGCACAGATCTGAGTCCTCAAGACTCTACCCTGCTGTCTGACATTGTTGAAATAGGTCCCCTCCCTAGCATTACTCGAGAAAATGAAGAAACACGATATGCCTTTTTTATTTTGACCTGTCAGGGTCTACGATTCGAGTGTTCAAGTATCTCCAAGATTCAGGTTAACTCTTGGTTGTTGGCTCTGCGAACCGACTGCAAATTGGGGACCGATACACAATTGACCCCATCCCATTAG 738 43.77 MDDCHGPRNINFIPDHFQATTPDLGSPQSSTSSLSQPRLENSSRSNNLSWSQRKLRSTTFRLNMFSLRRLSWGSSSEGQEKVVLTAAEVESLRSEVNDLEDKEAHLKAQIEHIHEILLSARLSGYLYMRTRWPELPGEPLPVDDTDVDDWLPRFVVLQGPCIFYYLLCTDLSPQDSTLLSDIVEIGPLPSITRENEETRYAFFILTCQGLRFECSSISKIQVNSWLLALRTDCKLGTDTQLTPSH 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4178504 4180100 + Conep09aG0087500.1 Cone9ag0855 445018

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0855 245 MobiDBLite consensus disorder prediction 13 50 - -
Cone9ag0855 245 PANTHER OS05G0595500 PROTEIN 5 236 - -
Cone9ag0855 245 CDD PH 122 229 - -
Cone9ag0855 245 SUPERFAMILY PH domain-like 121 231 - -
Cone9ag0855 245 MobiDBLite consensus disorder prediction 21 50 - -
Cone9ag0855 245 Coils Coil 82 109 - -
Cone9ag0855 245 Gene3D - 111 232 IPR011993 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0855 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0852 Cone-Chr6:4358532 Cone9ag0855 Cone-Chr9:4178504 6.25E-120 dispersed
Cone12ag0246 Cone-Chr12:1314949 Cone9ag0855 Cone-Chr9:4178504 3.13E-98 wgd
Cone8ag0242 Cone-Chr8:1385679 Cone9ag0855 Cone-Chr9:4178504 1.88E-98 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g138 . . . . . . Bma07g01686 . . . . . . . . . Cpe05g00604 . . . . . . . . . . . . . . Cone8ag0242 Cone12ag0246 . Cone9ag0855 . . . . . Blo19g00369 Bda07g01930 Bda09g00013 Bpe08g01521 . . . . Cmo02g01141 Cmo15g01093 . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007399 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 4 0 1 1 1 1 1 1 1 1 5 1 1 36