Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0887 ATGGATTGGGCGTTCTTGCATAAAGCTTGGGAGAGGTGGGCTTCCGTCAACATTGGCTCTTCTGATCAGCCATTGAAAGCTGCTTTGCTGATTAACTACGACCCAGCTGGACCATCTCGCTTGCTATCTACCATTGCAGAGCAAGGAGGTATAAAAGCAAATCCTACAGAATTGTATGAGCTAGTTAGTTTCATCAAACGCGACAAACCCCAGACTGAGAGTTTCATAGTTGGACCAAATCAATACATAGCCACGTCGATTCACGAGAAATGGTTCTGTGGAAGGTGCATTAACACATCAAACCCTGCTGGTGAAGGTGTTATTGTTATGCAAACAATGGCCTTCATTTTGGTTGCATTGTACGATGGATCTATCGCCTCTGCATCTCGTGCTATGGTGGCCGCTGATCAGTATGTGTGGCAGCTAACCCGGAAAAATCTTTGA 444 45.5 MDWAFLHKAWERWASVNIGSSDQPLKAALLINYDPAGPSRLLSTIAEQGGIKANPTELYELVSFIKRDKPQTESFIVGPNQYIATSIHEKWFCGRCINTSNPAGEGVIVMQTMAFILVALYDGSIASASRAMVAADQYVWQLTRKNL 147
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4326863 4328452 + Conep09aG0090900.1 Cone9ag0887 445050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0887 147 Pfam Profilin 10 139 IPR048278 GO:0003779(InterPro)
Cone9ag0887 147 Gene3D Dynein light chain 2a, cytoplasmic 9 146 - -
Cone9ag0887 147 SUPERFAMILY Profilin (actin-binding protein) 10 138 IPR036140 -
Cone9ag0887 147 PANTHER OS05G0241400 PROTEIN 1 147 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0883 Cone-Chr6:4503700 Cone9ag0887 Cone-Chr9:4326863 5.56E-93 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0887 - - - 0.0