Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0896 ATGCTGTTTTCTTCTGCCAAAAATTACTTCCAACTTTTCTGTATGGATGAATTCCAAATGGATAGTGCAGCTTATACCAGTTCCTTCTCCACTCATCTCTTGCCATCACTTGGAGCCAGAATCAACCAGACAACTCAACTTCGTCGATTCATTGTTTCACCGTTTAGTCCCTGCTATAGGGCTTGGGAGAACTTTCTGGTTATTCTTGTCATTTACTCAGCTTGGATTTGCCCGTTTGAGTTTGCATTTCTACCATACAAGCAGGATGCATTGTTCATCACTGATAACATTGTCAATGCCTTCTTTGTTGTTGACATCATTCTCACCTTCTTTGTTGCCTACCTTGACAGCCAGACCTATCTTCTTGTAGATGATCCAAAAAAAATTGCTATCAAGTACATATCTACCTGGTTTATTTTTGATGTCTGTTCCACAGCACCATTTCAATCTCTCAGCTTCTTGTTCACAAACCATAGCAGTGAACCGGAGTTTAAAATACTCAACATGCTTAGACTTTGGAGACTCAGAAGGGTCAGCTCTTTGTTTGCAAGACTCGAGAAGGACATCCGGTTCAATTATTTCTGGATCCGATGCACAAAGCTCACTGCTGTAACCTTCTTTGCAGTACATTGTGCTGGATGCTTCAACTACCTGATTGCAGACAAATACCCTGACCCAGAAAAGACATGGATTGGGGCGATGAACCCCAATTTCAAGGAAGACAGTCTTTGGAATAGATATATAAAATCAATTTACTGGTCCATCACAACATTGACTACCACTGGTTATGGTGACTTGCATGCAGAGAACCCCAGGGAGATGCTCTTTGATATCTTTTACATGCTGTTCAACTTGGGATTGACAGCTTATATCATCGGAAACATGACAAACCTTGTAGTTCACCGGACAAGTCGCACCAGAAATTTTAGGGATACGGTGAGAGCAGCTTCAGAATTTGCGTCACGAAATCAATTGCCCCCTCGCATGCAAGATGAGATGTTGTCACACTTATGTCTCAAATTCAAAACGGAAGGACTAAAGCAGCAAGAGACTTTAAATGGTCTGCCAAAAGCCATCCGCGCCAGCATTGCACAATTTCTCTTCTTTCCAGTCATTCAAAAAGTCTATTTCTTCCAAGGAGTTTCTCACGACTTTCTCTTCCAATTGGCCACAGATATAGAAGCCGAGTATTTCCCACCCAAAGAAGATGTAATACTGCAGAACGAGCCTCTAACAGATCTTTACATACTGGTCTTAGGCAGTGTGGAAATGCTTTCCAGTATCAATGGGCATGAACAAGTTCTTGGGAAGGCAATTGCAGGAGATATGTTTGGAGAGGTTGGGTTCTTATGTCAGAAGCCACAACCTTTCACGGTTCGGACAACCAAGCTATCTCAAGTACTACGAATCAAGAGGACTTCCCTGATGTATATTATTCAGTCAAACCCAGAAGATAGGAACATCATAGTGAACAATCTTTTCCTGAAACTGAAAGGGCAAGAAGGCATAAGCTCTGTATATTCACATATGGATCTTGGCTTGGACCTCAGTGAATGGATTGATGGAGGACCAATTAGAGGGAGTTGTTCTAACACAGAATGTCAAGATTCTTCACCAAGAGAGCAAACAAATCCCATGGGACAAGAGGTTAAAGAACCTAGAGAAGGTAATAGAATCATAAAGGATCTCTTATTAACACATGAAAATAGAAAAGAACCTGGAGAACATAGAATAGAGTTTATGACACCTCAAACAGCCGACAACATTGTGTATGGCCAAAGCAAACATGGAAGCCGAGGAGGTCCTTTAATTTCCAGTTCATACTTAGAAAACGCAGCCACAGGTTCATAA 1851 41.49 MLFSSAKNYFQLFCMDEFQMDSAAYTSSFSTHLLPSLGARINQTTQLRRFIVSPFSPCYRAWENFLVILVIYSAWICPFEFAFLPYKQDALFITDNIVNAFFVVDIILTFFVAYLDSQTYLLVDDPKKIAIKYISTWFIFDVCSTAPFQSLSFLFTNHSSEPEFKILNMLRLWRLRRVSSLFARLEKDIRFNYFWIRCTKLTAVTFFAVHCAGCFNYLIADKYPDPEKTWIGAMNPNFKEDSLWNRYIKSIYWSITTLTTTGYGDLHAENPREMLFDIFYMLFNLGLTAYIIGNMTNLVVHRTSRTRNFRDTVRAASEFASRNQLPPRMQDEMLSHLCLKFKTEGLKQQETLNGLPKAIRASIAQFLFFPVIQKVYFFQGVSHDFLFQLATDIEAEYFPPKEDVILQNEPLTDLYILVLGSVEMLSSINGHEQVLGKAIAGDMFGEVGFLCQKPQPFTVRTTKLSQVLRIKRTSLMYIIQSNPEDRNIIVNNLFLKLKGQEGISSVYSHMDLGLDLSEWIDGGPIRGSCSNTECQDSSPREQTNPMGQEVKEPREGNRIIKDLLLTHENRKEPGEHRIEFMTPQTADNIVYGQSKHGSRGGPLISSSYLENAATGS 616
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4384732 4387745 - Conep09aG0091800.1 Cone9ag0896 445059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0896 616 Gene3D Jelly Rolls 344 505 IPR014710 -
Cone9ag0896 616 MobiDBLite consensus disorder prediction 529 557 - -
Cone9ag0896 616 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone9ag0896 616 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone9ag0896 616 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone9ag0896 616 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone9ag0896 616 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone9ag0896 616 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone9ag0896 616 SUPERFAMILY cAMP-binding domain-like 304 493 IPR018490 -
Cone9ag0896 616 SMART cnmp_10 377 494 IPR000595 -
Cone9ag0896 616 CDD CAP_ED 377 486 IPR000595 -
Cone9ag0896 616 Pfam Ion transport protein 59 306 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone9ag0896 616 SUPERFAMILY Voltage-gated potassium channels 54 300 - -
Cone9ag0896 616 ProSiteProfiles cAMP/cGMP binding motif profile. 377 496 IPR000595 -
Cone9ag0896 616 FunFam Potassium channel KAT2 365 501 - -
Cone9ag0896 616 Gene3D - 61 300 - -
Cone9ag0896 616 PANTHER POTASSIUM CHANNEL AKT1 10 501 IPR045319 GO:0005249(InterPro)|GO:0006813(InterPro)
Cone9ag0896 616 MobiDBLite consensus disorder prediction 529 545 - -
Cone9ag0896 616 FunFam Potassium channel KAT3 61 301 - -
Cone9ag0896 616 Pfam Cyclic nucleotide-binding domain 396 482 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0655 Cone-Chr7:3406157 Cone9ag0896 Cone-Chr9:4384732 1.61E-211 dispersed
Cone5ag1593 Cone-Chr5:11198970 Cone9ag0896 Cone-Chr9:4384732 2.44E-239 wgd
Cone6ag0891 Cone-Chr6:4562253 Cone9ag0896 Cone-Chr9:4384732 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0896 K21867 - vvi:100233105 832.402