Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone9ag0901 | ATGGATTACCTGCTCTCCGCCCTCTTCTCCTCTACGATTCTCCGTTACCTCGTTTCTTTGATTTTTCTGCTTCTATTTCTGGACCAGATCTCATACTTGAAGAAGAAACGCGGCGTTCCAGGTCCTTCCATGGTGGTTCCTTTCTTAGGCAACGCTATCCCATTGGTCCGTGAACCCACTCGCTTCTGGGAGCTCCAATCAGCTATTGCCAAGTCATCCGGCCTCGGTTTCTCGGTCAACTATATCATCGGCAGGTTCATTGTGTTTCTCCGTGATACTGAGCTGTCGCACAAGATTTTCGCCAATGTACGGCCCGATGCCTTTACTGTTGTGGGCCACCCCTTCGGCAAGAAGCTTTTCGGCGAGCATAATATGATTTACATGACTGGCCAGGAGCACAAGGATATCCGCCGCCGGATCGCTCCTAACTTCTCCCCCAAGGCTCTCTCCACCTACACCGCGTTGCAGCAGGTTACTATCCTCAAGCATCTCAAGCTCTGGGAGAAGTTATCCACTGAAGACGCTTCCACGCCGATCACGTTGAGGTTTCTGGTCCGCGATATGAATTTGGAGACCTCGCAGGATGTGTTTGTTGGGCCTTACTTAGACCGTGAGTCCCGACAGAGGTTCAACGTGGATTATAATCTGTTCAACGTTGGACTTATGACGCTGCCCTTGGATTTACCCGGAACGGCGTTTCGAAATGCGAGGCTCGCCGTTGACCGGCTGGTGGAGACGCTAGCTGGATGTACGGAGCAGAGCAAAGCGAAAATGGCGAAAGGAGAAGAAGAGCCTTGGTGCTTGATTGACTTCTGGACTCAGGAGCTGGTGAAGGAGATCGAGGCAGCAGCTAAAGCCGGCGAGCGTATGCCAGCTAACACTGGAAACGTCGAGATCGGCTCGTATCTCTTCGATTTCCTCTTCGCGGCTCAAGATGCTTCGACTTCGTCGCTGCTCTGGGCCGTTACGCTCCTCGATTCTCATCCCGATGTCTTGGCGAAAATTCGGGAAGAAGTGCTGAGATTCTGGTCGCCAGAATCGGACACGCTCCTCACGGGAGAGCAGCTTATGCAGATGAAGTACACTCAAGCGGTGGCGCGTGAGGTTATCAGGTACAGAGCTCCGGCAACTATGGTCCCACATATTGCCAATGTGGACTTCCCGCTGACTCAATCTTACACGATACCTAAAGGAACAATCGTGTTTCCGTCCGTATTCGAATCGTCGTTTCAGGGATTCACGGAACCGGACCGGTTCGATCCGGAACGGTTTTCAGTTGAGCGAGAAGAAGACCTGATACATAAGCGAAACTACCTGGCGTTCGGGGCCGGGTCCCACCACTGCGTAGGACAACGGTATGCCCTGAATCACCTGGTTGTCTTCATCGCTATGTTCTCCACGCTGCTTGATTTCAAGAGGCATAGAACGGACGGCTGTGATGATATCGTGTATATACCTACAATCTGCCCGAAGGACGATTGCAAGGTTTACCTCAGCAGCCGTTGCACAAGGTATCCGAACCTTTCGTTGAACTAA | 1536 | 52.08 | MDYLLSALFSSTILRYLVSLIFLLLFLDQISYLKKKRGVPGPSMVVPFLGNAIPLVREPTRFWELQSAIAKSSGLGFSVNYIIGRFIVFLRDTELSHKIFANVRPDAFTVVGHPFGKKLFGEHNMIYMTGQEHKDIRRRIAPNFSPKALSTYTALQQVTILKHLKLWEKLSTEDASTPITLRFLVRDMNLETSQDVFVGPYLDRESRQRFNVDYNLFNVGLMTLPLDLPGTAFRNARLAVDRLVETLAGCTEQSKAKMAKGEEEPWCLIDFWTQELVKEIEAAAKAGERMPANTGNVEIGSYLFDFLFAAQDASTSSLLWAVTLLDSHPDVLAKIREEVLRFWSPESDTLLTGEQLMQMKYTQAVAREVIRYRAPATMVPHIANVDFPLTQSYTIPKGTIVFPSVFESSFQGFTEPDRFDPERFSVEREEDLIHKRNYLAFGAGSHHCVGQRYALNHLVVFIAMFSTLLDFKRHRTDGCDDIVYIPTICPKDDCKVYLSSRCTRYPNLSLN | 511 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 4418558 | 4420854 | + | Conep09aG0092300.1 | Cone9ag0901 | 445064 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone9ag0901 | 511 | CDD | CYP61_CYP710 | 76 | 494 | - | - | |
| Cone9ag0901 | 511 | Gene3D | Cytochrome P450 | 30 | 505 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0901 | 511 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 441 | 450 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone9ag0901 | 511 | Pfam | Cytochrome P450 | 40 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0901 | 511 | PRINTS | E-class P450 group IV signature | 432 | 448 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0901 | 511 | PRINTS | E-class P450 group IV signature | 448 | 466 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0901 | 511 | PRINTS | E-class P450 group IV signature | 359 | 375 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0901 | 511 | PRINTS | E-class P450 group IV signature | 39 | 56 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0901 | 511 | PRINTS | E-class P450 group IV signature | 407 | 425 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0901 | 511 | PRINTS | E-class P450 group IV signature | 300 | 326 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone9ag0901 | 511 | FunFam | Cytochrome P450 61 | 29 | 501 | - | - | |
| Cone9ag0901 | 511 | PANTHER | CYTOCHROME P450 26 | 40 | 465 | - | GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Cone9ag0901 | 511 | SUPERFAMILY | Cytochrome P450 | 32 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone6ag0896 | Cone-Chr6:4598550 | Cone9ag0901 | Cone-Chr9:4418558 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone9ag0901 | K09832 | - | csv:101221194 | 772.311 |