Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0915 ATGGAGAATGAACCTCTTCTTCTTCCATTCTTAAGTCCGAGAAAGAGATCATCTTCCACTACACTCTCCCCCCTCCCTGAATACGACGAGACCACTCTCCCTTTGACACCAAATGAGCTCAAAGACCTCCTCATCTTCGGCCCACCTTCTCCACAGGACCCATCTCCATTAATCGAAGCGCTAAATCTCCCTCGCATTTCATCTTTTCCTTCCTCTCCTCAAGACCTCTCCTCCGTCTCTGTTTTGATTCCCCAAGACCTTCAATCTCAATCGCAACAACGAGTCTCAATCGTCAAGCCAAACCCTAACTCCTCCCAATGGACGACCAAAACCAATCTCCGCCGTTCAAAAACCGCTCCCGCCATGGCCGTTATCAACGAAGTCAGCAATCTCAACGTGTCTAGACCTCAATTCGAAAAACAATCAATTGTCGGGCAAGCTTTCATCCTTCTCCTCTTGTATCTATCACTAGGTGTAATCATATATTGGCTCAATCGCGACAACTTTTCCGGACCTCAAACACATCCTATAGTTGATGCATTGTATTTCTGTATTGTAACTATGTGCACTATTGGCTATGGAGATATCACTCCTAATAGCCCTGCAACAAAACTGTTCTCAATTCTGTTCGTATTAGTCGGCTTTGGATTTGTCGATATTCTTCTTTCTGGAATGGTCTGCTATGTGCTTGATTTACAGGAGAGTTACTTGTTAAAAAATGTTAAAAACGGGGGGCAGAAAGAGGCGGGAAAATCTTACATAATAGATGTGAAGAAAGGGAGGATGAGGATTAGGATGAAAGTGGGATTGGCATTAGGGGTTGTGGTGCTATGTATTGGAATTGGTGTAGGAGTAATGCATTTTGTGGAGAGGATTGGGTGGTTGGATTCCGTTTATCTTTCAGTTATGTCTGTTACAACGGTTGGGTATGGGGACCGCGCTTTTGTTTCGATGGGGGGTCGTATTTTTGCTTCGATTTGGTTGCTTGTGTCTACGCTTGCTGTTGCTCGGGCATTTCTTTACTTGGCCGAGGCGAGAGTGGATAAGAGGCATAGGAAGATGACTAAATGGATACTTGGTCATGATATGACTGTGTCGGAATTCCTTGCTGCTGATATTGATAACAATGGCCTAGTGAGTAAATCAGAGTATGTGATATACAAACTGAAGGAGATGGGATTAATATCAGAGAAAGATCTAATGCAAATCTGCAACAAATTCGACATGTTAGACACCGGAAACTGTGGAAAAATAACCCTTGCAGATCTCGTGCAAAACCGTTATTGA 1287 43.67 MENEPLLLPFLSPRKRSSSTTLSPLPEYDETTLPLTPNELKDLLIFGPPSPQDPSPLIEALNLPRISSFPSSPQDLSSVSVLIPQDLQSQSQQRVSIVKPNPNSSQWTTKTNLRRSKTAPAMAVINEVSNLNVSRPQFEKQSIVGQAFILLLLYLSLGVIIYWLNRDNFSGPQTHPIVDALYFCIVTMCTIGYGDITPNSPATKLFSILFVLVGFGFVDILLSGMVCYVLDLQESYLLKNVKNGGQKEAGKSYIIDVKKGRMRIRMKVGLALGVVVLCIGIGVGVMHFVERIGWLDSVYLSVMSVTTVGYGDRAFVSMGGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRKMTKWILGHDMTVSEFLAADIDNNGLVSKSEYVIYKLKEMGLISEKDLMQICNKFDMLDTGNCGKITLADLVQNRY 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4502453 4504993 - Conep09aG0093800.1 Cone9ag0915 445078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0915 428 ProSitePatterns EF-hand calcium-binding domain. 372 384 IPR018247 -
Cone9ag0915 428 SUPERFAMILY EF-hand 366 425 IPR011992 -
Cone9ag0915 428 MobiDBLite consensus disorder prediction 1 31 - -
Cone9ag0915 428 Gene3D - 273 336 - -
Cone9ag0915 428 SUPERFAMILY Voltage-gated potassium channels 144 233 - -
Cone9ag0915 428 Pfam Ion channel 275 344 IPR013099 -
Cone9ag0915 428 Pfam Ion channel 149 223 IPR013099 -
Cone9ag0915 428 Gene3D - 337 427 - -
Cone9ag0915 428 PRINTS Two pore domain K+ channel signature 306 315 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cone9ag0915 428 PRINTS Two pore domain K+ channel signature 186 214 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cone9ag0915 428 MobiDBLite consensus disorder prediction 13 27 - -
Cone9ag0915 428 Gene3D - 124 254 - -
Cone9ag0915 428 FunFam Two-pore potassium channel 3 251 365 - -
Cone9ag0915 428 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 177 357 IPR003280 GO:0005267(InterPro)|GO:0005887(PANTHER)|GO:0009705(PANTHER)|GO:0015271(PANTHER)|GO:0016020(InterPro)|GO:0022841(PANTHER)|GO:0030322(PANTHER)|GO:0071805(InterPro)|GO:0071805(PANTHER)
Cone9ag0915 428 SUPERFAMILY Voltage-gated potassium channels 258 365 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0587 Cone-Chr19:5180283 Cone9ag0915 Cone-Chr9:4502453 1.20E-122 dispersed
Cone6ag0013 Cone-Chr6:94055 Cone9ag0915 Cone-Chr9:4502453 1.16E-48 dispersed
Cone9ag0012 Cone-Chr9:59796 Cone9ag0915 Cone-Chr9:4502453 2.87E-50 dispersed
Cone1ag0247 Cone-Chr1:1641684 Cone9ag0915 Cone-Chr9:4502453 6.02E-115 wgd
Cone10ag1423 Cone-Chr10:11013242 Cone9ag0915 Cone-Chr9:4502453 7.53E-92 wgd
Cone5ag1609 Cone-Chr5:11296569 Cone9ag0915 Cone-Chr9:4502453 1.77E-169 wgd
Cone6ag0909 Cone-Chr6:4668373 Cone9ag0915 Cone-Chr9:4502453 2.72E-60 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0915 K05389 - csv:101220017 574.704