Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0931 ATGTTTGAGGCAATCAAACCTGCTGCTGCTGATCATGAGGAGACGATCAATTCTGCTACGAGCCTTAACCCTAGGGTTCGAGGAAACGATGAAAACAAGGAGGAGCCTGAGGAGGGAGAGATCGTAGGAGACGCTGATTCGACGTCGTCGAGGCCTTCATCGGCGGTTGGTCGGTCGCTGCATCCTCTGGAAGTTTCATGGACCTTCTGGTTCGATAATCCCTCCGCGAAGTCCAAGCAAGCTGCCTGGGGTGACTCCAACCGCCCGATCTATACCTTCTCCACTGTCGAGGATTTTTGGGGCGTTTACAATAACATTCATCATCCGAGCAAGTTAGCTATGAAATCGGATTTGTATTGTTTCAAGCATGAGATTGAACCAAAATGGGAGGATCCTATTTGTGCGACTGGAGGGAAGTGGACTGTAACCACTGCAGGAGGAAAATCTGATACTTATTGGCTATATACGTTGCTTGCAATGATCGGAGAGCAGTTTGATCATGGAGATGAAATTTGTGGGGCAGTTGTTAATGTTAGAAAAGGAGAGGATAAAGTTTCTATCTGGACCAAGAATGCTTCTAATGAATCAGCTCAGGTGAGCATTGGGAAACAATGGAAGGAGTTTCTCAATTACAATGAAACTATAGGATTTATATTCCATGAGGATGCCAGTAAATTCAACAGGAAGAACCGCTACACGACATGA 705 45.82 MFEAIKPAAADHEETINSATSLNPRVRGNDENKEEPEEGEIVGDADSTSSRPSSAVGRSLHPLEVSWTFWFDNPSAKSKQAAWGDSNRPIYTFSTVEDFWGVYNNIHHPSKLAMKSDLYCFKHEIEPKWEDPICATGGKWTVTTAGGKSDTYWLYTLLAMIGEQFDHGDEICGAVVNVRKGEDKVSIWTKNASNESAQVSIGKQWKEFLNYNETIGFIFHEDASKFNRKNRYTT 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4570020 4572145 + Conep09aG0095400.1 Cone9ag0931 445094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0931 234 Gene3D RNA Cap, Translation Initiation Factor Eif4e 54 234 IPR023398 -
Cone9ag0931 234 FunFam Eukaryotic translation initiation factor 4E 53 234 - -
Cone9ag0931 234 ProSitePatterns Eukaryotic initiation factor 4E signature. 117 140 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
Cone9ag0931 234 Pfam Eukaryotic initiation factor 4E 62 214 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Cone9ag0931 234 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 31 228 IPR001040 GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER)
Cone9ag0931 234 MobiDBLite consensus disorder prediction 1 57 - -
Cone9ag0931 234 SUPERFAMILY eIF4e-like 42 230 IPR023398 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0183 Cone-Chr15:874156 Cone9ag0931 Cone-Chr9:4570020 2.19E-62 dispersed
Cone19ag0360 Cone-Chr19:2988873 Cone9ag0931 Cone-Chr9:4570020 2.19E-35 dispersed
Cone7ag0345 Cone-Chr7:1505292 Cone9ag0931 Cone-Chr9:4570020 8.29E-67 dispersed
Cone13ag0453 Cone-Chr13:4772963 Cone9ag0931 Cone-Chr9:4570020 2.20E-34 transposed
Cone6ag0928 Cone-Chr6:4749111 Cone9ag0931 Cone-Chr9:4570020 4.90E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0931 K03259 - csv:101206312 343.199