Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0941 ATGGCAGAAACTGCAGCTGGTAATGGAAACCATGGCGTTGTTGTGAACGTCAAAGATGATGATCTCAATCACAACTCGTCCAGTTTTGTCTCCATATCTTTCATTCAAAAGATGATTGCAGAGATGCTGGGCACATATTTCTTGATATTTGCAGGGTGTGCATCAGTTGTGGTGAATCTGAGTGAAGACAAAGTGATCACTTCTCCTGGGATTTCTATTGTCTGGGGCCTTGTTGTTATGGTCATGATCTATTCAGTCGGTCATATTTCCGGCGCTCACTTTAACCCTGCTGTCACCATTGCCTTTGCCTCTACCAAGAGATTCCCATGGAAACAGGTGCCGGCATACTTATCATCACAAATCCTTGGATCAACACTAGCAAGTGGAACCCTTAGGCTACTATTCAATGGAAAGCAAGACCATTTTGCTGGAACGCTTCCATCCGGGTCGGATCTCCAGTCGTTTGTGATCGAGTACATAATCACATTTTACCTCATGTTTGTCGTCTCCGGCGTCGCTACCGATAATCGTGCAATTGGTGAACTTGCTGGACTTGCCGTTGGCTCAACAGTGCTGCTTAACGTCATGTTTGCTGGGCCGATTTCTGGAGCATCGATGAACCCGGCAAGAAGCCTGGGTCCCGCAATAGTGGCAAGCCATTATAGGGGAATATGGATATATCTTTTGGCGCCAACTCTTGGTGCAATTTCAGGTGCATGGGTCTATAATATCATCAGGTTTACGAACAAGCCTTTAAGAGAGATCACCAAGAGTGGTTCTTTCCTGAAAGGAGTTGGTCGTTCTGGGTCTGCTAATTAA 819 45.79 MAETAAGNGNHGVVVNVKDDDLNHNSSSFVSISFIQKMIAEMLGTYFLIFAGCASVVVNLSEDKVITSPGISIVWGLVVMVMIYSVGHISGAHFNPAVTIAFASTKRFPWKQVPAYLSSQILGSTLASGTLRLLFNGKQDHFAGTLPSGSDLQSFVIEYIITFYLMFVVSGVATDNRAIGELAGLAVGSTVLLNVMFAGPISGASMNPARSLGPAIVASHYRGIWIYLLAPTLGAISGAWVYNIIRFTNKPLREITKSGSFLKGVGRSGSAN 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4650979 4653087 - Conep09aG0096400.1 Cone9ag0941 445104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0941 272 PANTHER AQUAPORIN NIP2-1 25 250 IPR034294 -
Cone9ag0941 272 CDD MIP 36 245 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone9ag0941 272 Pfam Major intrinsic protein 30 242 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone9ag0941 272 Gene3D Glycerol uptake facilitator protein. 9 256 IPR023271 -
Cone9ag0941 272 PRINTS Major intrinsic protein family signature 36 55 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone9ag0941 272 PRINTS Major intrinsic protein family signature 112 131 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone9ag0941 272 PRINTS Major intrinsic protein family signature 75 99 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone9ag0941 272 PRINTS Major intrinsic protein family signature 188 210 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone9ag0941 272 PRINTS Major intrinsic protein family signature 157 175 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone9ag0941 272 PRINTS Major intrinsic protein family signature 225 245 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone9ag0941 272 SUPERFAMILY Aquaporin-like 29 256 IPR023271 -
Cone9ag0941 272 NCBIfam MIP family channel protein 40 242 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone9ag0941 272 ProSitePatterns MIP family signature. 93 101 IPR022357 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0847 Cone-Chr16:9050087 Cone9ag0941 Cone-Chr9:4650979 5.50E-75 dispersed
Cone18ag1202 Cone-Chr18:8571293 Cone9ag0941 Cone-Chr9:4650979 8.95E-101 dispersed
Cone2ag0195 Cone-Chr2:1031566 Cone9ag0941 Cone-Chr9:4650979 3.90E-72 dispersed
Cone4ag0541 Cone-Chr4:2431182 Cone9ag0941 Cone-Chr9:4650979 5.30E-75 dispersed
Cone7ag0514 Cone-Chr7:2368611 Cone9ag0941 Cone-Chr9:4650979 4.70E-22 dispersed
Cone8ag0521 Cone-Chr8:3729290 Cone9ag0941 Cone-Chr9:4650979 4.44E-63 dispersed
Cone5ag1638 Cone-Chr5:11560497 Cone9ag0941 Cone-Chr9:4650979 3.83E-127 wgd
Cone6ag0938 Cone-Chr6:4829715 Cone9ag0941 Cone-Chr9:4650979 4.15E-187 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0941 K09874 - vvi:100263543 430.639