Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag0944 ATGACGTCGGGAACGAGAATGCCGACGTGGAAGGAGAGGGAGAACAACAAGAGGAGAGAGAGACGTCGGAGAGCGATCGCGGCGAAGATCTTCGCCGGGCTGAGGATGTACGGAAACTACAAGCTTCCCAAACACTGCGACAACAACGAGGTTCTAAAAGCTCTCTGCGACGAAGCCGGCTGGACTGTCGAAGAAGACGGTACTACCTACAGAAAGGGATGCAAACCATTGGAAAGCAGGGACATAGTAGGCGGGTCAGCTTCTGCAAGTCCATGCTCATCATACCAACCAAGCCCATGTGCATCGTACAATCCAAGTCCTGGCTCATCTTCTTTCCCAAGCCCAACTTCATCTCGATACACCGCTAAAGCCAATAATGGCAACGCCGATCCCAATTCCCTTATCCCATGGCTTAAGAACCTCTCATCAGGCTCATCATCATCTTCCTCATCAAAGATGGCCCACCAACTCTACATCCCTGGTTGCTCCATAAGTGCCCCGGTCACTCCTCCTCTGAGCTCCCCAACTGCCCGAAGCCCACGTAACAAGAATGATTGGGATGATCTGACAGCTAGTGCTGCATGGGCCGCACAGCACTTCTCTTACCAGCCCTCTTCGACCCCACCAAGCCCAGGCCGTCAGGTTTTGCCTGATCCGGGTTGGCTTTCTGGGATCCGAATCCCCCAAAGCGGGCCATCATCTCCTACATTTAGCCTTGTGTCACGAAATCCATTTATATCTAGGGAGGAGGTTTTGTCTGGTGCTGGGTCTAGGATGTGGACCCCAGGACAAAGTGGGACATGTTCTCCTGCTGTCACGGCGGGTCGTGATCAGACAGCTGATGTTCCAATGTCTGATGGGATTGCAGCTGAGTTTGCTTTTGGTAGCAATACGACTGGTTTGGTCAAGCCATGGGAAGGAGAGAGGATCCATGAGGAATGTGTTTCGGATGATCTTGAACTCACCCTTGGCAGCTCAAGGACTAGATAA 990 52.42 MTSGTRMPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCDEAGWTVEEDGTTYRKGCKPLESRDIVGGSASASPCSSYQPSPCASYNPSPGSSSFPSPTSSRYTAKANNGNADPNSLIPWLKNLSSGSSSSSSSKMAHQLYIPGCSISAPVTPPLSSPTARSPRNKNDWDDLTASAAWAAQHFSYQPSSTPPSPGRQVLPDPGWLSGIRIPQSGPSSPTFSLVSRNPFISREEVLSGAGSRMWTPGQSGTCSPAVTAGRDQTADVPMSDGIAAEFAFGSNTTGLVKPWEGERIHEECVSDDLELTLGSSRTR 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4662970 4665674 - Conep09aG0096700.1 Cone9ag0944 445107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag0944 329 MobiDBLite consensus disorder prediction 1 21 - -
Cone9ag0944 329 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 142 IPR008540 -
Cone9ag0944 329 MobiDBLite consensus disorder prediction 103 126 - -
Cone9ag0944 329 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 329 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag0204 Cone-Chr6:962545 Cone9ag0944 Cone-Chr9:4662970 1.00E-128 dispersed
Cone7ag1804 Cone-Chr7:11802434 Cone9ag0944 Cone-Chr9:4662970 8.85E-51 dispersed
Cone8ag0795 Cone-Chr8:7987106 Cone9ag0944 Cone-Chr9:4662970 2.85E-45 dispersed
Cone6ag0940 Cone-Chr6:4839207 Cone9ag0944 Cone-Chr9:4662970 4.24E-220 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46846 PF00251 Glyco_hydro_32N 3.90E-71 CL0143 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag0944 - - - 0.0