Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1036 ATGAATTTCATAACAAATACAAAATCTTTAACTATCCTTCTTTTCCTAGCTTGCTTCTATCTAATTCCTATCAAAACCATAGACACCATAACATCGTCTACACCAATCAAAGACCCTCAAACTATACTCTCTAATGGAAACATCTCCAAACTTGGATTTTTTACCCCGGAAAATTCTACTAAACGGTATCTTGGAATTTGGCTCAATCAAATTTCAGCTCAAACTATTATATGGATAGCTAATAGAGACAAGCCACTCAACAATTCTTCTGGTCTTTTCACATTATCTCAAGATGGAAATCTTGTATTAACCGATGGAGAGAATGAAACTCTTTGGTCTTCAAATCTTTCAAATGTTGTTCGTAATTCAAGCGCACGGCTTTTAGACAGCGGGAATCTCGTCTTGCAAGATTTATCGACAGGGATACCCACATGGGAGAGTTTCAAACACCCATGTGACAAACTTTTGCCAAAGATGAAATTTACTACAAATCTGATCACTAAAGAGAAAATTCAACTTGTTTCATGGAGAACCTCATTAAATCCCTCTATGGGAAACTTTTCCCTTGCCCTAGACGCCCGCCTTCCTGCTGAAGCTGTTATTTTGAAAAATGGTGAACTACATTATAGAACCGGTCCATGGAATGGTCAAATTTTTTTAGGTATTCCCGGTATGGATTCGAGTTATCTTTATGGATTTAGTCTTGTATCTGAAGATGGAATTAGTACTTTTTCTTATGCAAATATAAGTGATCCTCTTGAGATGACTTTGTTCTTGACTCCACAAGGGAATCTAGAGCAGAAACAATGGAACAAAGAAGGGAAGGATTGGATAGCTGAGTGGACTGCTGTGAAAAATGAATGTGATGTATATGGAGCTTGTGGTAAATTTGGGATTTGTAATTCAATAAAATTACCCATTTGCAGTTGTTTAAAAGGGTATGAGCCAATGAATGTAGAGGAGTGGAATAGACAGAATTGGACAAGTGGGTGTGTGAGAAAGAAATTATTGAAGTGTGAGAGGGAGAGTAGCAACATGAGTGGAAATGGAGGGAAAGAAGATGGGTTTCTTACGCTTAAAATGGTTAAAGTGCCCTACTTTGCGATTTATTTAAGCGATCCTTATACGGAAGAAGACTGTCGATACCAGTGCTTGTTAAATTGTACTTGTAATGCATATTCATATGAATCTAGATTTGGCTGTATGTTATGGAATGATAACTTGATTGACATGCAACAATTTCTAAATGGAGATACAGAACTCTACCTTCGGTTAGCCGCTTCTGAACTAGATACAGCTAAGAACATCACAATTATTGTCTCTGTTTCGGTAATGTCCGGTTTTCTTACATTAGTCATATGCATTTACTTCTTATGGAAGTGGAGGGTGAAACAAAGAGTAGGGGGAAAGAAAAGCAAGGAGGTATTGTTACACAACGTTGGAGAACCATATCTAATGTTTCCAGGTGATAACATGCGTGGGGATACCCTTTTCCAATTTGAAAAACTAGCAACCGCAACAAACAATTTTAGTTTGGATAACAAGCTTGGACAAGGAGGTTTTGGTCCTGTTTACAAGGGAAAATTTTCTGACAAACAAGAAATAGCTGTAAAAAGACTTTCCAAAGCTTCCGAACAAGGAGTCGAAGAATTTACAAATGAAGTGATAGTTATGTCCAAGCTTCACCATAGGAATGTGGTGAGGCTTCTTGGATGTTGTGTTGAGACAGGAGAAAGGATGTTGATATATGAATACATGCCAAATAGAAGCTTGGATTCATTTCTCTTCGATCCATCAAAATCACTACTTTTAGATTGGAGAAAGCGGTTCAGCATTATTGAAGGCATTGCTCGAGGTCTTCTTTACTTACATAGGGATTCAACGTTAAGAATTATTCATAGAGATCTCAAGGCAAGCAACATTCTTCTGGACGTAGACTTAAATCCGAAAATTTCGGATTTTGGTATGGCTAGGATCTTTGGTTGCAATCAAGATCAAGCCAATACGAAAAGGGTCATGGGTACATACGGCTATATGGCACCTGAATACGCTATGGCGGGGAGATTTTCGGAGAAATCAGACGTCTTTAGCTATGGAGTCTTATTGCTCGAAATTGTTTGTGGGAGGAAAAACTCAAGTTTCTACCAAGATGAATATGTTTTAAGCCTTTTAGAATATGCATGGAAATTGTGGAATGAAGACAACATCACAGCTTTGGCAGACAGAGCAATATTAGATTCCGCCTACGAAAGGGAGATAGTAAGGTGCATCCACTTAGGATTATTATGTGTACAAGAATCGGCAATAGATAGGCCAAATGTGTCGACTATCATTTCCATTCTGAGAAGTGAAATTGTGGAAATTTCACCTCCAAACAAGCCTGCATTCACTGATAGGCAGATTTCTGATGATACGGAATTCCCAGAAAATTTCAACGGAAGATGTTCTACAAATAAGGCCACAATAACTGTTGTCGAAGGCAGATAA 2487 37.96 MNFITNTKSLTILLFLACFYLIPIKTIDTITSSTPIKDPQTILSNGNISKLGFFTPENSTKRYLGIWLNQISAQTIIWIANRDKPLNNSSGLFTLSQDGNLVLTDGENETLWSSNLSNVVRNSSARLLDSGNLVLQDLSTGIPTWESFKHPCDKLLPKMKFTTNLITKEKIQLVSWRTSLNPSMGNFSLALDARLPAEAVILKNGELHYRTGPWNGQIFLGIPGMDSSYLYGFSLVSEDGISTFSYANISDPLEMTLFLTPQGNLEQKQWNKEGKDWIAEWTAVKNECDVYGACGKFGICNSIKLPICSCLKGYEPMNVEEWNRQNWTSGCVRKKLLKCERESSNMSGNGGKEDGFLTLKMVKVPYFAIYLSDPYTEEDCRYQCLLNCTCNAYSYESRFGCMLWNDNLIDMQQFLNGDTELYLRLAASELDTAKNITIIVSVSVMSGFLTLVICIYFLWKWRVKQRVGGKKSKEVLLHNVGEPYLMFPGDNMRGDTLFQFEKLATATNNFSLDNKLGQGGFGPVYKGKFSDKQEIAVKRLSKASEQGVEEFTNEVIVMSKLHHRNVVRLLGCCVETGERMLIYEYMPNRSLDSFLFDPSKSLLLDWRKRFSIIEGIARGLLYLHRDSTLRIIHRDLKASNILLDVDLNPKISDFGMARIFGCNQDQANTKRVMGTYGYMAPEYAMAGRFSEKSDVFSYGVLLLEIVCGRKNSSFYQDEYVLSLLEYAWKLWNEDNITALADRAILDSAYEREIVRCIHLGLLCVQESAIDRPNVSTIISILRSEIVEISPPNKPAFTDRQISDDTEFPENFNGRCSTNKATITVVEGR 828
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5546112 5549668 - Conep09aG0106700.1 Cone9ag1036 445199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1036 828 CDD STKc_IRAK 516 781 - -
Cone9ag1036 828 SMART ntp_6 351 425 IPR003609 -
Cone9ag1036 828 Pfam D-mannose binding lectin 75 177 IPR001480 -
Cone9ag1036 828 Gene3D - 24 149 IPR036426 -
Cone9ag1036 828 PIRSF SRK 2 828 IPR024171 GO:0004674(InterPro)
Cone9ag1036 828 Gene3D Phosphorylase Kinase; domain 1 490 585 - -
Cone9ag1036 828 Gene3D Transferase(Phosphotransferase) domain 1 586 790 - -
Cone9ag1036 828 FunFam Liguleless narrow1 586 789 - -
Cone9ag1036 828 SMART serkin_6 510 786 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1036 828 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Cone9ag1036 828 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 215 IPR036426 -
Cone9ag1036 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone9ag1036 828 Pfam Protein tyrosine and serine/threonine kinase 511 742 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone9ag1036 828 ProSiteProfiles Protein kinase domain profile. 510 761 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1036 828 SUPERFAMILY Protein kinase-like (PK-like) 495 781 IPR011009 -
Cone9ag1036 828 ProSiteProfiles PAN/Apple domain profile. 339 426 IPR003609 -
Cone9ag1036 828 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 489 585 - -
Cone9ag1036 828 CDD PAN_AP_plant 348 426 - -
Cone9ag1036 828 CDD B_lectin 35 151 IPR001480 -
Cone9ag1036 828 SMART blect_4 33 151 IPR001480 -
Cone9ag1036 828 Pfam PAN-like domain 352 411 IPR003609 -
Cone9ag1036 828 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 148 - -
Cone9ag1036 828 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544(InterPro)
Cone9ag1036 828 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 793 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag1044 Cone-Chr6:6007871 Cone9ag1036 Cone-Chr9:5546112 0 dispersed
Cone9ag1036 Cone-Chr9:5546112 Cone9ag1057 Cone-Chr9:5762145 3.48E-221 dispersed
Cone9ag1036 Cone-Chr9:5546112 Cone9ag1037 Cone-Chr9:5554390 0 tandem
Cone12ag1397 Cone-Chr12:10281423 Cone9ag1036 Cone-Chr9:5546112 1.82E-101 wgd
Cone14ag1104 Cone-Chr14:9211550 Cone9ag1036 Cone-Chr9:5546112 6.06E-152 wgd
Cone15ag1114 Cone-Chr15:9112166 Cone9ag1036 Cone-Chr9:5546112 6.85E-172 wgd
Cone6ag1043 Cone-Chr6:5995292 Cone9ag1036 Cone-Chr9:5546112 1.13E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83188 PF02798 GST_N 4.90E-12 CL0172 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1036 - - - 0.0