Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1050 ATGCAGACTAGGTATATGGAAAGATCGAACAGTATGGCGAGAGAAAAGAGAGGTTTAGATCCAGCTTCAGCTGAAGAAGGCCAGCCCGAGAGGAAAAGACCTGCTTTAGCCAGTGTAATTGTTGAAGCTCTCCAGGTGGACAGTCTGCAGAAACTCTGCTCGTCATTGGAGCCTATCCTTAGAAGAGTAGTTAGTGAAGAAGTGGAGCGTGCTTTAGCAAAATTAGGACCTGCTCAACTTACAGGAAGGTCTTCTCCAAAATGTATTGAAGGGCCTGATGGAAGAAACTTGCAGCTTCACTTCAGGTCAATGTTTTCTCTTCCTCTCTTTACGGGTGGGAAAGTAGAAGGGGAGCAAGGGGCCTCAATCCATGTTGTTCTGATTGATGCAAATACCGACCGTGTAGTCACATCAGGTCCAGAGTCCTCGGTGAAGCTAGATATCGTTGTGCTTGAAGGTGATTTCAACAGTGAAGATGATGATAACTGGACTGAAGAAGAGTTTGACAGTCATGTCGTTAAGGAGCGTGAAGGAAAAAGGCCCCTTCTAAATGGGGATTTGCAAGTTACTCTGAAGGAAGGTGTGGGAACACTAGGGGAGCTGACTTTTACTGACAACTCTAGCTGGATAAGAAGCAGGAAATTCAGGCTGGGTTTGAAGGTTGCCTCAGAGAATTCTGAGGGCATTCGCATACGTGAAGCAAAAACGGATGCCTTCGCTGTTAAGGATCACCGTGGAGAATTATACAAAAAGCATTATCCACCTGCATTGAGTGATGAGGTCTGGAGATTGGAGAAGATTGGAAAAGATGGATCATTTCACAAAAAGCTGAATAAAGCTGGAATATACACTGTTGAGGACTTTCTGAGGCTAGCGGTTAGAGACTCACAAAGGTTGCGGAATATTCTTGGTAGTGGCATGTCAAATAAGATGTGGGATGTTCTTGTAGAGCATGCAAAGACCTGTATTCTAAGTGGGAAACTCTATGTTTACTATCCCGATGATGCAAGGAATGTTGGTGTGGTATTTAACAATATCTATGAACTGAGTGGCTTAATCACTAATGGACAGTATCACTCATCTGATGTTCTCTCCGACAGTCAGAAGGTATATGTGGACACTTTGGTTAAGAAGGCATATGGCAATTGGATGCATGTTATTGAGTATGATGGCGCATCTCTTCTAAGCTTTAAGCAGAATACAATCTCAGGCGCTTCTCAAACTGAAGATCCAATTAGCTCACAAGGTTACTCAAATGTCTTCAATCAGCAGTATGGACTACCCAGCCTGCCAGCTTCCATTCCGTCAGAGCAGCCCTCTTTGGATTCAGTCGTCCCAGTTGGAGGTGACAACAACAATATGGCTTCCAAATTCACAGCCCAATCACAGAACTTGAATCTCAATACTCCCACAATGCAATTTGGTGGCCCTACTCCATTCCCTTCACAAAACCAATTAATCAGCCTTTCACAGGGACCTCTCTTTTCAAGAACTGAAAACATGCTAGCCCTTGGCCAACAACCATCCACATCATCATATTTCCAGCCAGTCAACACATCGTCCAATCTTCCTTGTAAACAACCATCAACATCATCATCATATTTCCAGACAGTCAACACATCATCCAGTCTTCCTTACAAGGGACCTACAGAAGATTTCTTCTCTGAGGAAGAAATCCGAATGAGAAGCCATGAGATTCTCGAAAACGACGATATGCAACATCTCCTTAGAATATTCAACATGGAAGGAAACAGACATGGTCCCACCTCCTCCACAAATGTCATAGGTGAAAATACTTACCCATATTTATCCGCATCTTCCACATATATGCCTACAACTCCATCTATAAACTACAATTTCAAGGACGAACAGACCAGATCATCCGGAAAAGCTGTTGTGGGTTGGCTTAAGCTTAAGGCAGCCCTTAGATGGGGCATTTTCGTTAGGAAGAAAGCAGCTGAAAGACGGGCTCAGCTTATAGAGCTGGATGACTGA 1995 43.81 MQTRYMERSNSMAREKRGLDPASAEEGQPERKRPALASVIVEALQVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAQLTGRSSPKCIEGPDGRNLQLHFRSMFSLPLFTGGKVEGEQGASIHVVLIDANTDRVVTSGPESSVKLDIVVLEGDFNSEDDDNWTEEEFDSHVVKEREGKRPLLNGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASENSEGIRIREAKTDAFAVKDHRGELYKKHYPPALSDEVWRLEKIGKDGSFHKKLNKAGIYTVEDFLRLAVRDSQRLRNILGSGMSNKMWDVLVEHAKTCILSGKLYVYYPDDARNVGVVFNNIYELSGLITNGQYHSSDVLSDSQKVYVDTLVKKAYGNWMHVIEYDGASLLSFKQNTISGASQTEDPISSQGYSNVFNQQYGLPSLPASIPSEQPSLDSVVPVGGDNNNMASKFTAQSQNLNLNTPTMQFGGPTPFPSQNQLISLSQGPLFSRTENMLALGQQPSTSSYFQPVNTSSNLPCKQPSTSSSYFQTVNTSSSLPYKGPTEDFFSEEEIRMRSHEILENDDMQHLLRIFNMEGNRHGPTSSTNVIGENTYPYLSASSTYMPTTPSINYNFKDEQTRSSGKAVVGWLKLKAALRWGIFVRKKAAERRAQLIELDD 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5685892 5690479 - Conep09aG0108100.1 Cone9ag1050 445213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1050 664 PANTHER OS02G0177800 PROTEIN 14 656 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Cone9ag1050 664 Pfam Calmodulin binding protein central domain 257 322 IPR046830 -
Cone9ag1050 664 Pfam Calmodulin binding protein-like N-terminal domain 97 244 IPR046831 -
Cone9ag1050 664 Pfam Calmodulin binding protein C-terminal domain 327 389 IPR046829 -
Cone9ag1050 664 MobiDBLite consensus disorder prediction 1 32 - -
Cone9ag1050 664 MobiDBLite consensus disorder prediction 9 32 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0127 Cone-Chr1:711425 Cone9ag1050 Cone-Chr9:5685892 3.99E-161 dispersed
Cone5ag1738 Cone-Chr5:12354027 Cone9ag1050 Cone-Chr9:5685892 2.02E-165 dispersed
Cone6ag1054 Cone-Chr6:6149450 Cone9ag1050 Cone-Chr9:5685892 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1050 - - - 0.0