Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1056 ATGGGTTATATTAATCGGGCATTATTACTATACATGTGGGTATTGATTGGGTTGATGTTGATTTCTTACAAGATACCGTTTTCTTCTGCGGACACTGATCTTCGTGATGTTGCGGCAGTGAATGCCTTGTTTGTAGCTCTTGGCTATCCTCCTCTCACGGGTTGGATCCTTGTTGGAGGTGATCCCTGTGGAGAAAAGTGGCAAGGAGTTGAGTGTGTTTTTACAAATATAACAGCAATAAGACTAAGCGGTACAAATTCTGGAGGGCAACTCGGTGATACCTTGGGATCATTTGAATCGATAATGGAAATAGATCTTAGCAACAACCATATTGGGGGGAGTTTTCCAATTGTATTGCCCCCTACCCTTAGAAACTTGTCGCTGAGCAGTAACCTTCTAACTGGGGGAATACCAGATGCATTTCAGTTGCTTAGTGGTCTGACAACCCTGGACATTTCGGGGAACAATTTGACTAGTCAGCTCCCTCCCTCAATGGGAAGTTTGTCATTGCTTTCTAAATTACACTTGCAGAACAATCAACTTTCAGGAACCCTTGATGTGTTGCAGACTCTTCCACTTACGGATCTGAACATAGAGAACAATCTATTTTCTGGGCCTATACCTCCAAAGTTGTTGACTATTCCGAATTTCAGAAAAGATGGAAATCCATTTAATAGTACTATAATTCCAACTCCCACAGCACCATCTCCTTCACCTCTTGCTAGGACAACTGGCCCTTTCACCTCAGCGATACCACCTGCATCAATATGGGCAATAGGACCATCTGGCTCTGAAACACTGAAATCTAATGGATCGAAGAAATTTTTTACAGCGAATAAGATTATTTGGATTGCTATTATAGGGGTGGTGATAGTAGTTGCACTAGTACTCTGTCTTTGCACGTCAAGATACGTGATTGGGAGAAAGGAAAGACAAAATACTCAGAGATATGAGAATGGCGTGTTTAATAGCTCTTCAGAGAAGCCTAATTATAGTGAAGTCTTACCTCCTCAGAGAAAGAATGACATAGAAAAAGGAGAACCAAAGGAGACTGTCCTGAAACCAGCAGACAGATTGGGAATGCATAATGGAAGAACGAATTTGACTCCAAAAGTGCAAGACAAGAAAGAGAGAGATGAGAGAATAATAGCATCAGCTAGTTCGCCACATAGGAAAGATCATGAGATAATGGATACTTCAAGCACGGATGATAATTTCTTGCCGCCACCACCTCCTCTTCCTCCATTTCTAGTTGAAAAGCCCATAAATTCGAAATTGACTGCCCAAGCACCCACTAGTAGATGCCCTACCAAAATTGTAAACTCAAGCTGTAGAGAAATTTTCTCCGTTGCAACCCTCCAATTGTACACAAACAGTTTCTCTGAGGAGAATTTTATTGGAACAGGCATGCTTGGTAGCGTCTATAAAGCCGAACTTCCTAGTGGAAAGATGTTGGCAGTAAAGAAACTGGATACTACAGCCTCAAGGTGGCAAAGTGATGAAGAATTTCTAGAACTAGTGTCTAACATCTCCAAAATCCACCATACTAACATAGTGGAGCTTGTTGGTTACTGTTTTGAGCATGGTCAGCGCCTTCTTGTTTATGAGTACTGCAAAAATGGGACACTTTTTGATGCACTACACATGGATGAAGAGATTCATAGGAAACTTTCATGGAATATGCGTATAAGGGCTGCCCTTGGAGTTGCAAGAGCCCTAGAGTATTTGCATGAGGTCTGCAATCCACCCATTATGCACCGGAACCTTAAATCGGGTAATCTTCTCTTTGATGATGAGCTTAAAGTACGTGTATCGGACTGTGGTTTAGCTCCTCTACTATCATATGGCTCTGCAAATCAGTTGTCTGGTTATGGAGCCCCAGAATTCGAGTTAGGAAGTTATACTTATCAGAGTGATGTATATAGCTTTGGAGTTGTAATGCTTGAGATCCTCACTGGGCGGAAAGCTTGTGACAGGTCACGGCCTAAGGGAGAACAATTTCTGGTCAGATGGGCAATCCATCGGCTTCATGATATCAACACATTATCAAAGATGGTTGATCCATCTCTAAATGGCATCTATCCCGTCAAATCATTATCTCGTTTTGCTGATATAATCTCCTCATGTGTACAGAGTGAGCCGGAATTTAGGCCGCAAATGTCAGAAATTGTCCAAGAACTGTTACAGATGCTCTAA 2196 41.94 MGYINRALLLYMWVLIGLMLISYKIPFSSADTDLRDVAAVNALFVALGYPPLTGWILVGGDPCGEKWQGVECVFTNITAIRLSGTNSGGQLGDTLGSFESIMEIDLSNNHIGGSFPIVLPPTLRNLSLSSNLLTGGIPDAFQLLSGLTTLDISGNNLTSQLPPSMGSLSLLSKLHLQNNQLSGTLDVLQTLPLTDLNIENNLFSGPIPPKLLTIPNFRKDGNPFNSTIIPTPTAPSPSPLARTTGPFTSAIPPASIWAIGPSGSETLKSNGSKKFFTANKIIWIAIIGVVIVVALVLCLCTSRYVIGRKERQNTQRYENGVFNSSSEKPNYSEVLPPQRKNDIEKGEPKETVLKPADRLGMHNGRTNLTPKVQDKKERDERIIASASSPHRKDHEIMDTSSTDDNFLPPPPPLPPFLVEKPINSKLTAQAPTSRCPTKIVNSSCREIFSVATLQLYTNSFSEENFIGTGMLGSVYKAELPSGKMLAVKKLDTTASRWQSDEEFLELVSNISKIHHTNIVELVGYCFEHGQRLLVYEYCKNGTLFDALHMDEEIHRKLSWNMRIRAALGVARALEYLHEVCNPPIMHRNLKSGNLLFDDELKVRVSDCGLAPLLSYGSANQLSGYGAPEFELGSYTYQSDVYSFGVVMLEILTGRKACDRSRPKGEQFLVRWAIHRLHDINTLSKMVDPSLNGIYPVKSLSRFADIISSCVQSEPEFRPQMSEIVQELLQML 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5752906 5759691 - Conep09aG0108700.1 Cone9ag1056 445219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1056 731 MobiDBLite consensus disorder prediction 369 400 - -
Cone9ag1056 731 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 425 537 - -
Cone9ag1056 731 Gene3D Transferase(Phosphotransferase) domain 1 538 730 - -
Cone9ag1056 731 Pfam Protein tyrosine and serine/threonine kinase 464 727 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone9ag1056 731 MobiDBLite consensus disorder prediction 338 356 - -
Cone9ag1056 731 MobiDBLite consensus disorder prediction 317 409 - -
Cone9ag1056 731 Gene3D Ribonuclease Inhibitor 46 236 IPR032675 -
Cone9ag1056 731 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 538 731 - -
Cone9ag1056 731 ProSiteProfiles Protein kinase domain profile. 460 731 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1056 731 Pfam Leucine rich repeat 121 181 IPR001611 GO:0005515(InterPro)
Cone9ag1056 731 SUPERFAMILY Protein kinase-like (PK-like) 438 727 IPR011009 -
Cone9ag1056 731 SUPERFAMILY L domain-like 36 216 - -
Cone9ag1056 731 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 36 727 IPR046959 -
Cone9ag1056 731 MobiDBLite consensus disorder prediction 317 332 - -
Cone9ag1056 731 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 123 236 - -
Cone9ag1056 731 Gene3D Phosphorylase Kinase; domain 1 422 537 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0827 Cone-Chr7:6173636 Cone9ag1056 Cone-Chr9:5752906 4.97E-126 dispersed
Cone8ag1487 Cone-Chr8:11333661 Cone9ag1056 Cone-Chr9:5752906 2.10E-179 dispersed
Cone9ag1056 Cone-Chr9:5752906 Cone15ag1154 Cone-Chr15:9341508 1.99E-66 dispersed
Cone12ag1436 Cone-Chr12:10403858 Cone9ag1056 Cone-Chr9:5752906 1.91E-182 wgd
Cone6ag1064 Cone-Chr6:6225237 Cone9ag1056 Cone-Chr9:5752906 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83190 PF01388 ARID 5.70E-07 CL0123 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1056 - - - 0.0