Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1059 ATGAAGAAGTACTACTGCTTCTCGATCAAATCAATACCCACTTCCTTACTCATCTTTCTCACGATCATCTTGGTCAATTTTAGCATAACTAACGCTATTCCATCCTACGTTTACCATATATGCTCAAACGAAACAACTTTCACTCCAAACAGCAACTTCCAATCCAACCTCAACCTCCTTCTCTCCATCCTCTCCACCAACGCCAGCGTAAGCGGCGGTTTCTACAACGCCACTGTCGGTCGAACCTCCAACAGCACCGTCTACGGCCTGTTCCAGTGCAGAGGTGACGTCACCACCGCCACATGTCAAGAGTGTGTCTCTTACGCAACAACCTATGTGGTCCGGCCCGAAATCTGCCCCATCGAAAAAGTCGTCATCATCTGGTTCGATGAGTGCATTTTACACTATTCCAACACGTCGTTTTTCTCCACTATAGTGGAAGTCCCCACTGTGTCTCTCCTCAACACAGTAGATATTGATGAAGTCTACAGAGCAGACTTCATCATACTTGTCATCCCAACGTTGAACAATGCTAAGGTTCTGGCGACGAGAAATTGGCCCGGGAGACGGAATTTTGCTACCCAGGAGTCACGTTTCTCAGAAAATCAAACACTTTACACACTTGTACAGTGCACTTCGGACCTGTCAAGTTCTGCCTGTGGTACATGTTTAGACGACGCAATTGGACAAATTGCTAGTTGTTGCACTCAAAAGAGAGGTGGAAGGGTCTTGTTTCCTAGTTGTTTTGTGAGATATGAAGTCTACAGCTTTTATAATCTGGAGACTCCGGCGCCTCCAGATTCAGTGGGGCCTCCCGACCTTCCTCCAGATTCAGTGGCGCCTCCTGACCTTCCTACAGATAAAGGAAATAAGGGAATTTCAACGGTTCAAATTATCTTCATTGTTGTTTCAATAGTCCTCTTCCTTCTCATCATCGGATGTCTTTTTCTCTGGAGATCACGAGTAACAAAGAATTACACTCCAGTAAGAGAATATAGTGGAAGCAATGAGATCTCTACAGTTGAATCTTTGCGATTCGATTTCCCGACTATAAAGGATGCCACAAACAATTTCTCAAAAGATAACAAACTGGGTAGGGGCGGATTTGGAGAAGTATATAAGGGTAGACTTCCAGATGGGCAACATGTAGCAGTGAAGAGGTTATACAAACACTCGGTTCAAGGTTCAGAAGAGTTTCAGAATGAGGTTATGTTGGTTGCGAAGCTTCAACACAAGAACTTGGTGCGGCTATTTGGATTTTGCATGGAAGGGGAAGAGAAAATACTCATCTTTGAATTTGTGAAGAACAAAAGCCTGGATAGTTTCCTTTACGACCCCGAAAAACAAGGACAATTGGATTGGTTAAGACGGTACCAGATAATAGGAGGAATTGCTCGAGGGATTCTTTATCTTCATGAAGATTCTCGATTGAAAATTATTCACCGTGATATTAAAGCAGGAAATATATTGTTAGACGATGATTTGAGTCCTAAAATTTCAGACTTCGGAATGGCAAGAATTGTCCGGATGGACCAAACTGAAGAAAATACTCGTAGGGTTGTCGGAACATATGGTTACATGTCTCCAGAATATGCAATGCACGGATTGTTTTCCCTAAAGTCAGATGTGTATAGCTTTGGAGTTTTAGTCTTGGAGATCATAAGTGGCAAGAAAATCAATAAATATCTATCTGATTGTGCTGAAGATCTTTTGAGCTATGCCTGGAAGCTCTGGAAGTGTGGAAAACCCTTGGAATTAGTGGATCCAACTCTAAGAGATTCTTACTCAAGTAATGAAGTCCTTAGATGCATCCAGATAGGTTTACTATCTGTTCAAGAGGATCCAGCTGATAGGCCATCAATGGCATCGATTGTTCATACGCTTAATAGCTACTCTGTTGCTTTACCTTTACCTAAACAGCCAGCATTTTTCATTGGAAGTAGATACCGTGACATTCCGGAAAATGAAATGAAGGCTGATGATCAATCAACAAGCATGTCGAACAAACAACATTCAATTAATGGAGCATCAATAACTGAACTGGGACCACGATAG 2055 42.48 MKKYYCFSIKSIPTSLLIFLTIILVNFSITNAIPSYVYHICSNETTFTPNSNFQSNLNLLLSILSTNASVSGGFYNATVGRTSNSTVYGLFQCRGDVTTATCQECVSYATTYVVRPEICPIEKVVIIWFDECILHYSNTSFFSTIVEVPTVSLLNTVDIDEVYRADFIILVIPTLNNAKVLATRNWPGRRNFATQESRFSENQTLYTLVQCTSDLSSSACGTCLDDAIGQIASCCTQKRGGRVLFPSCFVRYEVYSFYNLETPAPPDSVGPPDLPPDSVAPPDLPTDKGNKGISTVQIIFIVVSIVLFLLIIGCLFLWRSRVTKNYTPVREYSGSNEISTVESLRFDFPTIKDATNNFSKDNKLGRGGFGEVYKGRLPDGQHVAVKRLYKHSVQGSEEFQNEVMLVAKLQHKNLVRLFGFCMEGEEKILIFEFVKNKSLDSFLYDPEKQGQLDWLRRYQIIGGIARGILYLHEDSRLKIIHRDIKAGNILLDDDLSPKISDFGMARIVRMDQTEENTRRVVGTYGYMSPEYAMHGLFSLKSDVYSFGVLVLEIISGKKINKYLSDCAEDLLSYAWKLWKCGKPLELVDPTLRDSYSSNEVLRCIQIGLLSVQEDPADRPSMASIVHTLNSYSVALPLPKQPAFFIGSRYRDIPENEMKADDQSTSMSNKQHSINGASITELGPR 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5793588 5803152 - Conep09aG0109000.1 Cone9ag1059 445222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1059 684 ProSiteProfiles Protein kinase domain profile. 358 643 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1059 684 Gene3D - 170 257 IPR038408 -
Cone9ag1059 684 Gene3D - 33 141 IPR038408 -
Cone9ag1059 684 MobiDBLite consensus disorder prediction 266 286 - -
Cone9ag1059 684 Pfam Salt stress response/antifungal 41 138 IPR002902 -
Cone9ag1059 684 Pfam Salt stress response/antifungal 191 254 IPR002902 -
Cone9ag1059 684 FunFam cysteine-rich receptor-like protein kinase 10 434 635 - -
Cone9ag1059 684 MobiDBLite consensus disorder prediction 659 677 - -
Cone9ag1059 684 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 34 141 - -
Cone9ag1059 684 SMART serkin_6 358 632 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1059 684 MobiDBLite consensus disorder prediction 266 282 - -
Cone9ag1059 684 ProSiteProfiles Gnk2-homologous domain profile. 35 141 IPR002902 -
Cone9ag1059 684 ProSiteProfiles Gnk2-homologous domain profile. 147 257 IPR002902 -
Cone9ag1059 684 FunFam Cysteine-rich receptor-like protein kinase 25 149 257 - -
Cone9ag1059 684 SUPERFAMILY Protein kinase-like (PK-like) 343 655 IPR011009 -
Cone9ag1059 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone9ag1059 684 CDD TM_EGFR-like 291 321 - -
Cone9ag1059 684 Pfam Protein tyrosine and serine/threonine kinase 360 627 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone9ag1059 684 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 157 644 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0042742(PANTHER)
Cone9ag1059 684 CDD STKc_IRAK 364 629 - -
Cone9ag1059 684 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524(InterPro)
Cone9ag1059 684 MobiDBLite consensus disorder prediction 657 684 - -
Cone9ag1059 684 Gene3D Phosphorylase Kinase; domain 1 322 433 - -
Cone9ag1059 684 FunFam Cysteine-rich receptor-like protein kinase 10 320 433 - -
Cone9ag1059 684 Gene3D Transferase(Phosphotransferase) domain 1 434 635 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone9ag1059 Cone-Chr9:5793588 Cone9ag1065 Cone-Chr9:5949046 0 dispersed
Cone9ag1058 Cone-Chr9:5768217 Cone9ag1059 Cone-Chr9:5793588 1.37E-110 tandem
Cone9ag1059 Cone-Chr9:5793588 Cone9ag1060 Cone-Chr9:5810152 5.07E-113 tandem
Cone8ag1453 Cone-Chr8:11225071 Cone9ag1059 Cone-Chr9:5793588 1.38E-36 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83193 PF13639 zf-RING_2 8.20E-13 CL0229 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1059 - - - 0.0