Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1102 ATGGCTTCAACAGTAGAAGTTGATGACGACAATGAAACCAAAGGCAGTATGTGGGTTTTGGACCAGAAGTTTGATCAGCCTATGGAGGAGGAAGCCGGTAGGCTTAGAAATATGTACAGAGAAAAGAAATTCTCTGCCTTATTGCTTCTCCGGCTTGCATTCCAAAGCCTTGGAGTGGTTTATGGTGATTTGGGGACTTCTCCTTTGTATGTTTTCTACAACACATTTCCTCATGGAATTGATGATCCAGAAGATGTAATAGGAGCTCTTTCCTTAATCATATACTCTCTCACTCTTGTCCCTCTCCTCAAGTATGTCTTCATAGTCTGCAGAGCCAATGACAATGGTCAAGGGGGAACATTTGCTCTCTATTCATTGCTATGTCGACATGCAAAAGTCAACACTATTCCGAATCAACATCGGACTGATGAGGAGCTAACGACGTATAGCCGGTCCACATTCCATGAAAGATCTTTTGCTGCGAAGACAAAGAGATGGCTAGAGGGACATGTCTTAAAGAAGAATCTTCTGCTCTTACTTGTCCTTCTGGGAACTTGTATGGTGATAGGAGATGGTATTCTCACTCCTGCAATTTCAGTTCTTTCGGCAGCTGGTGGCATCAAGGTGGACCACCCCAGTTTGAACAATGGTGTAGTGGTGCTTGTTGCAGTGGTGATACTAGTATGTCTATTCAGCTTGCAACATTATGGAACTGATAAAGTTGGTTGGCTCTTTGCTCCTATTGTGCTTCTATGGTTTCTCATGATAGGAGGTATAGGCATCTTCAATATCTGGAAATACGATAGGAGCATTCTAAAAGCCTTTTCACCTGTCTATATATATCGCTATTTTAAAAGGGGAGGGAGAGATGGTTGGACCTCCCTTGGAGGCATAATGCTAAGTATAACAGGGACTGAGGCACTTTTTGCTGATCTAGCTTATTTTCCGGTATCAGCTATACAGATTGCTTTTACTATAGTTGTGTTTCCTTGCCTCCTCTTAGCATATTCCGGACAAGCCGCTTACCTTGTCCAGAATAAAGACCATGTTATTGATGCCTTTTATCACTCAATCCCAGATAGCATATACTGGCCAGTTTTTGTTGTAGCAACATTAGCAGCTATTGTTGCTAGTCAGGCCACAATTTCCGCAACCTTTTCAATAATCAAGCAAGCCCATGCCCTTGGTTGCTTTCCGAGGGTCAAAGTAGTCCATACATCAAAGAAGTTTCTTGGCCAAATATACGTTCCGGATATTAACTGGATCCTAATGGTTCTTTGTATCGCTGTTACGGCCGGATTTAATAACCAGAATCAAATCGGAAATGCTTATGGGACAGCTGTTGTAATTGTCATGCTCGTTACAACATTACTTATGATCCTAATCATGATTTTGGTCTGGCGTTGCCACTGGATCCTTGTCGTAATCTTCACTGCTTTATCTCTTGTTGTGGAGTGCACTTACTTCTCTGCTGTGCTCTTCAAAATTGACCAAGGTGGGTGGGTACCGCTTGTAATAGCGGCCGCCTTTCTTCTCATCATGTATGTCTGGCACTATGGTACCGTTAAACGATATGAATTCGAAATGCACAGTAAGGTTTCGATGGCGTGGGTTCTTGGGCTTGGGCCCAGTTTAGGACTTGTCCGGGTCCCAGGAATTGGGCTTGTGTACACTGAGCTAGCTAGTGGGGTCCCACACATATTTTCCCACTTCATTACTAATCTTCCCGCCATTCATTCCGTTGTTGTGTTTGTCTGTATGAAGTACCTTCCAGTATATACCGTCCCGGAAGAAGAGAGATTCCTTGTCAAGAGAATTGGGCCCAAGAGTTTCCACATGTTCCGTTGTGTTGCAAGGTATGGTTATAAAGATCTTCATAAGAAAGACGATGATTTCGAGAAGAAGTTGTTTGATAACCTCTTCTTGTTCGTTCGGTTAGAGTCAATGATGGAAGGTTGTTCAGATTCGGATGAATATAGTCTATATGGTCAACAAACTGTCCAGTCGACGGATGGTGTTTTGGCGATTAACACGAGCAATGGAGTAGGAGTGGGAGATTCACTGTGTAATATGGACTCCACTATGTCGTCAGGCAGCGACTTGATTCGGCCGGTCAGGTCTCCTTTGCATCAGAATCTTACAGTGATGTCGTCTGGTCAGGGGAGTTATCAGACCGAGACTGATGAGCTGGAATTCACGAATAATTGTAGAGATGCAGGAGTGGTTCATATACTGGGGAATACTGTAGTAAGAGCAAGGAGGGATTCAAGATTTTACAAGAAAATAGCTGTCGATTATATATATGCTTTTCTTAGAAAGATTTGCAGGGAAAATAGTTTCATCTTCAATGTTCCTCATGAGAGCTTATTAAACGTTGGACAAGTTTTCTATGTATAG 2397 42.76 MASTVEVDDDNETKGSMWVLDQKFDQPMEEEAGRLRNMYREKKFSALLLLRLAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDVIGALSLIIYSLTLVPLLKYVFIVCRANDNGQGGTFALYSLLCRHAKVNTIPNQHRTDEELTTYSRSTFHERSFAAKTKRWLEGHVLKKNLLLLLVLLGTCMVIGDGILTPAISVLSAAGGIKVDHPSLNNGVVVLVAVVILVCLFSLQHYGTDKVGWLFAPIVLLWFLMIGGIGIFNIWKYDRSILKAFSPVYIYRYFKRGGRDGWTSLGGIMLSITGTEALFADLAYFPVSAIQIAFTIVVFPCLLLAYSGQAAYLVQNKDHVIDAFYHSIPDSIYWPVFVVATLAAIVASQATISATFSIIKQAHALGCFPRVKVVHTSKKFLGQIYVPDINWILMVLCIAVTAGFNNQNQIGNAYGTAVVIVMLVTTLLMILIMILVWRCHWILVVIFTALSLVVECTYFSAVLFKIDQGGWVPLVIAAAFLLIMYVWHYGTVKRYEFEMHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCMKYLPVYTVPEEERFLVKRIGPKSFHMFRCVARYGYKDLHKKDDDFEKKLFDNLFLFVRLESMMEGCSDSDEYSLYGQQTVQSTDGVLAINTSNGVGVGDSLCNMDSTMSSGSDLIRPVRSPLHQNLTVMSSGQGSYQTETDELEFTNNCRDAGVVHILGNTVVRARRDSRFYKKIAVDYIYAFLRKICRENSFIFNVPHESLLNVGQVFYV 798
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7060104 7064196 - Conep09aG0113400.1 Cone9ag1102 445265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1102 798 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 45 797 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cone9ag1102 798 Pfam K+ potassium transporter integral membrane domain 52 537 IPR053951 -
Cone9ag1102 798 NCBIfam potassium uptake protein 52 798 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cone9ag1102 798 Pfam K+ potassium transporter C-terminal domain 551 795 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone20ag0928 Cone-Chr20:6678096 Cone9ag1102 Cone-Chr9:7060104 4.38E-54 dispersed
Cone8ag1589 Cone-Chr8:11821346 Cone9ag1102 Cone-Chr9:7060104 1.80E-201 dispersed
Cone9ag0365 Cone-Chr9:1619204 Cone9ag1102 Cone-Chr9:7060104 1.71E-153 dispersed
Cone9ag1102 Cone-Chr9:7060104 Cone9ag1103 Cone-Chr9:7071652 0 tandem
Cone5ag1492 Cone-Chr5:10053485 Cone9ag1102 Cone-Chr9:7060104 0 transposed
Cone6ag1107 Cone-Chr6:6921913 Cone9ag1102 Cone-Chr9:7060104 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1102 K03549 - cit:102617335 1352.81