Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1115 ATGGTAGAGGAGCTTGGTAGAGACTCAGACGGTGAGAGAAGTACGTCGGCAAATTCGAGCAAAACTTCTATGAGTAGTGAGAGTTGCAGCAGCTTTAGCCGTCTCTCCTTCGACGTGGCTCTCGATTTTCCGACCACTCGATCTTCCCCGGAGAACATGAGCTTGAAACCTCACCGCTCTTCAGATTTCACTTACTCTGCCATTCAGTGCCGCAAAATGAAACTCAGTTACCATGACTTTCGCCTCCTTCGCCGCATTGGCAATGGAGATATCGGTACTGTCTACCTCTGCCGACTCCGGAGCTCCGGCGTGGATGATGAGGATCCTGATCCCTGTCTCTACGCCATGAAAGTGGTGGACAAGGAGGCCTTGGAGAAGAAGAAGAAGGTGCAGAGGGCGGAGATGGAGAAGAAGATTTTGAAAATGCTGGACCATCCTTTTCTGCCTACTCTCTTCGCAGAGTTTGAGGCCTCTAATTTGTCTTGCATCGTTATAGAATTTTGCTCCGGCGGAGACTTGCATTCCCTCCGCCATAAGCAGCCACTCAAACGCTTCTCGCTCAGCTCTGCGAGATTCTATGCGGCCGAGGTTCTAGTAGCGCTAGAGTACCTCCACATGTTAGGAATCATCTACAGAGACCTGAAACCAGAGAACGTGCTTGTTAGATCAGACGGTCATATCATGCTCTCAGATTTCGACCTTTCGCTCTGCTCAGATGCAATCGCAGCTGTTGAATCCCCCGACTCTGACCCAGACCCTGCATTCCCCGCTTCACTATCCTACTCTCGGAGACGCGCAACAAAAGCACCAACCTCACACTTTTCCTGCCTCACGAACCGGATCTTCCGGTCACGCAAGGTCCAAACTCTCACCCCGAAATGGCTCTTCGTGGCCGAGCCGGTAACCGCCCGTTCTTGCTCTTTTGTCGGAACGCACGAGTACGTTTCACCCGAGGTCGCCTCTGGTAGGTCCCACGGAAACGCCGTTGACTGGTGGGCCTTTGGGATCTTTGTCTACGAGTTGATCTACGGCCGTACACCATTCGCGGCTACATCAAACGAAATTATACTGCGAAACATCGTAAACGAACCCCTGAAGTTTCCAACACCGACACCTTCTTGCACGCTGGAGCTCCACGCGCGTGATCTCATATACGGGTTGCTAAACAAAGACCCGGTGAGTAGAGTCGGGTCGAAGCGTGGATCCGCTGACGTCAAGAAACATCCGTTCTTTAAAGGCCTCAACTTTGCCCTCGTACGATCACTAACACCACCTGAGGTGCCTAGTTTGAGTAGGCTTAATACGACGCCATATTGCCGCGCCAAGAGCAATAGGCAAGCAACGGCCTTTGATTATTTTTGA 1362 51.76 MVEELGRDSDGERSTSANSSKTSMSSESCSSFSRLSFDVALDFPTTRSSPENMSLKPHRSSDFTYSAIQCRKMKLSYHDFRLLRRIGNGDIGTVYLCRLRSSGVDDEDPDPCLYAMKVVDKEALEKKKKVQRAEMEKKILKMLDHPFLPTLFAEFEASNLSCIVIEFCSGGDLHSLRHKQPLKRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIAAVESPDSDPDPAFPASLSYSRRRATKAPTSHFSCLTNRIFRSRKVQTLTPKWLFVAEPVTARSCSFVGTHEYVSPEVASGRSHGNAVDWWAFGIFVYELIYGRTPFAATSNEIILRNIVNEPLKFPTPTPSCTLELHARDLIYGLLNKDPVSRVGSKRGSADVKKHPFFKGLNFALVRSLTPPEVPSLSRLNTTPYCRAKSNRQATAFDYF 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7183955 7186692 - Conep09aG0114700.1 Cone9ag1115 445278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1115 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone9ag1115 453 Gene3D Phosphorylase Kinase; domain 1 78 167 - -
Cone9ag1115 453 PANTHER FLIPPASE KINASE 1-RELATED 20 438 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cone9ag1115 453 MobiDBLite consensus disorder prediction 12 31 - -
Cone9ag1115 453 MobiDBLite consensus disorder prediction 1 31 - -
Cone9ag1115 453 SUPERFAMILY Protein kinase-like (PK-like) 54 432 IPR011009 -
Cone9ag1115 453 FunFam protein kinase PINOID 2 78 167 - -
Cone9ag1115 453 Gene3D Transferase(Phosphotransferase) domain 1 168 235 - -
Cone9ag1115 453 FunFam protein kinase PINOID 168 236 - -
Cone9ag1115 453 ProSiteProfiles Protein kinase domain profile. 80 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1115 453 SMART serkin_6 80 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1115 453 Gene3D Phosphorylase Kinase; domain 1 430 440 - -
Cone9ag1115 453 Coils Coil 116 141 - -
Cone9ag1115 453 Gene3D Transferase(Phosphotransferase) domain 1 305 429 - -
Cone9ag1115 453 Pfam Protein kinase domain 305 411 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1115 453 Pfam Protein kinase domain 81 235 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone8ag1613 Cone-Chr8:11935714 Cone9ag1115 Cone-Chr9:7183955 2.55E-112 dispersed
Cone9ag1115 Cone-Chr9:7183955 Cone19ag0650 Cone-Chr19:5557915 1.68E-07 dispersed
Cone9ag1115 Cone-Chr9:7183955 Cone14ag0490 Cone-Chr14:2403091 8.98E-118 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83199 PF05922 Inhibitor_I9 1.40E-06 CL0570 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1115 - - - 0.0