Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1213 ATGGGACTGGGAAATTTTGTACATAGAACAAATGGAGACAGTCATGAGGGCTGTTTTCCTGGTGAGAGTGAAGAATCAGGAAGTCAGTCCTGCCATAGTGATGACGGGGAGGCTGGACAGGAGACTTGCCGTGTGTGCCAATGTACCGAGCCTGAAAAAAGAGGCGAGGCCATTTTAGAATTTCTGGGCATTACTCCTCCACTTGAAGAACCAAGAGAATCTAATAAGGATGTGAAGTCAGATACCATGGAAGATTTAAAAAGAAACGTAGATAATGGGTTTTCCGACAAGAAAAATGTTAAAAGAGAATCTGGTTTGATTGAGTTTGTAAGCCCTGATGGGGACATTTTCATTTGTAATATGGATTTAGAAATGGGTTCATGCCATAATCAAGATTCATTGGTGGTGCTTGGTTGTTCTTGTAAAAGTGACCTTGCTCTTGTACACTATGCATGTGCACTGAAGTGGTTTGTTAGCCATGGATCCACTGTCTGTGAAATCTGTGGATGCATGGCAAAAAATATTAGGATTGCTGACTTTAAAAAGGTAGTCGGTTCTTTAAAGGAATATGAAGCATTGCGGGAAAGAACTGCTGGTGGGGAACCTAATCCTACACATGTTTCTACAACTCCTGGTGTAGATCCCGATGCTGTTGCTGCTATTCGCAGGCAAAGACTGAGTGAGATCTCATTGTGGTTTGGCCCACATAATTATTCCAATAATAACTCGAATGCAGTTTCTCAGGCTGTATCTGAACAACAACCTGTTAGTATTGTCTCAGAGGATGTCGGGCCTGCTGAAAATCCTGCAACCAAGTGGGCTATTGAAGGCACTGGGATTCTTCTGGCGACAGGGCTACTTACTGTTTCTCTTGCATGGCTCATAGCTCCTCGCATGGGAAAGAATACTGCCAAAAGTGGTCTTCATATCCTGCTTGGTGGAGTTTGTGCTTTGACAGTTGTGGTTGTGTTCCGATTTTTTGTTCTTAGCAGAATAAAGTATGGTCCTGCACGCTATTGGGCTATTCTGTTTGTCTTTTGGTTTCTTGTGTTTGCCATTTGGGCTTCCCGGAGACACGCTACTCGTACAACATAA 1095 43.2 MGLGNFVHRTNGDSHEGCFPGESEESGSQSCHSDDGEAGQETCRVCQCTEPEKRGEAILEFLGITPPLEEPRESNKDVKSDTMEDLKRNVDNGFSDKKNVKRESGLIEFVSPDGDIFICNMDLEMGSCHNQDSLVVLGCSCKSDLALVHYACALKWFVSHGSTVCEICGCMAKNIRIADFKKVVGSLKEYEALRERTAGGEPNPTHVSTTPGVDPDAVAAIRRQRLSEISLWFGPHNYSNNNSNAVSQAVSEQQPVSIVSEDVGPAENPATKWAIEGTGILLATGLLTVSLAWLIAPRMGKNTAKSGLHILLGGVCALTVVVVFRFFVLSRIKYGPARYWAILFVFWFLVFAIWASRRHATRTT 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8806032 8809912 - Conep09aG0124700.1 Cone9ag1213 445376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1213 364 ProSiteProfiles Zinc finger RING-CH-type profile. 111 175 IPR011016 GO:0008270(InterPro)
Cone9ag1213 364 Pfam RING-variant domain 130 168 IPR011016 GO:0008270(InterPro)
Cone9ag1213 364 MobiDBLite consensus disorder prediction 1 38 - -
Cone9ag1213 364 PANTHER ZINC FINGER, RING-CH-TYPE 29 352 - -
Cone9ag1213 364 SMART ringv_2 128 169 IPR011016 GO:0008270(InterPro)
Cone9ag1213 364 Coils Coil 83 103 - -
Cone9ag1213 364 SUPERFAMILY RING/U-box 130 171 - -
Cone9ag1213 364 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 178 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone6ag1236 Cone-Chr6:9837870 Cone9ag1213 Cone-Chr9:8806032 6.88E-219 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1213 - - - 0.0