Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1249 ATGTCTTTGGCTGAATCGGAAGAAGATGCTGGCAGTCATGCAGAGCCTCCTGATCCAGATATTCTTGACATTGATCCGACTTGCCTCTACATTCAGTACAAGGATGTGCTTGGGAAAGGTGCTTTCAAGACAGTTTACAAGGCATTTGATGAAGTTAATGGACTTGAAGTAGCATGGAACCAAGTTCGAATTGACGAGGTGCTGCAGTCACCAGACGACTTGGAAAGGCTGCACTCAGAAGTGCACCTTTTGAAGTCATTAAAGCATAATAACATTGTGCAATTCTACAATTCATGGATTGATGATAAAAACAAGACTGTTAACATTATTACCGAGTTGTTTACCTCTGGCAGCCTCAGACAGTACCGTAAGAAACACAAGAATGTTGAATTGAAAGCAGTTAAGGGATGGGCAAGGCAGATTTTGATGGGTTTGAACTACCTCCATAGTCACAATCCACCAATTATACATAGGGATTTGAAGTGTGATAACATATTTATCAATGGTAATCAAGGAGAGGTTAAAATTGGAGACCTTGGGTTGGCAACTGTTATGCAGCAGGACACTGCCTCAAGTGTGATTGGTACGCCTGAGTTTATGGCACCTGAGCTATACGATGAGAATTACAATGAGTTGGCTGACATATATTCATTTGGAATGTGCATGCTAGAGATGGTGACTTTTGAATATCCATATAGTGAGTGTAGAAACTCTGCCCAGATATACAAGAAAGTCACATCTGGAATAAAGCCTGCTGCTCTATCTAAAGTGAAGGATCCAGATACAAAACGATTTATTGAGAAATGTCTAGTACCTGCATCTCAGAGATTATCAGCTAAGGAGCTTCTAATGGATCCTTTTCTCCAAGCAAATGGAACAGTAAGAAACCGTCCTCTTCCACTTCCTGATATTGTTCTTCCCAAAACGGGAGCCTTTGGAGATCGTTGTTTGATGTCAGAAGGACCTGCTAGTGCACGAAATAGACTTCTGGATGCAGATAGTGATGGTGAACCCCCTGCTATCACTACATTCGATGCTTCTGTTGAGGGTGGGCCCCAATCTGCTGGTGTAGAGGTTCAGAGGTCCAAGAGAGGGATTTTATTCATCTTAAAAGATGCAGGTCGTGCTAGGAACATCCATTTTATATTCTACCTAGACAGTGATACAGCTCTCTCTGTTTCGAGCGAAATGGTTGTGCAACTACAACTTGCTCATCAGAACGTCACGCTCATTGCAGAATTAATTGACTTGTTATTAATAAACTTGGTACCCAATTGGAAACCTTGTGTTCATATAGAGCATTTAATTCCTCCAAGAGGTAGACTAACTCCTCTAGCTCATGAGACACAATCTCAAGTGAAAAACCCCATAGAAACTCCACCTAAATCTCACCCTGAGGATTGCGAGTCGTGCAATAATTCTAATAATGCTTCAACCTCACAATTTATCCCTAATAAACCTCCCCCTTTCCCTGGATTGATTCCACCACTAGAAGAAAAACTGAATGAGATTATGCCTAGTTCAAAGGTAGAGGACAGGTGGTCAGAAATGTCTTATGTTTCTGCAACCTCCGATGAGTATGATGGAAATTACTCTATTGATTTATATATTTCAGCCGGGTCCACTGGGTCTTTGGATTTGCATCAATCTAGGTATGAAATGGGCCCATCTTCCCCTCCCTATAATAGCAAGGTTTTGGATAATGATATTCCTTCCGGTGGGAACCAGTTCTTTCCTTATGCAACCAGTGCATCCGGTTTGTCTGACGACGATGGTGGTGGTGATGATGATGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGTTGACACTGGAGTTGGGAATGATTGAACTGCAGTTTGAAGAGGCTATGAAAGAAGTCTACAAAAAGAAGGAAGAAGCTATCAAGGAGACAAGAAGAAGGTTGTCTCGGAAAAAGTCTGGATCATTTTGCTAA 1989 41.48 MSLAESEEDAGSHAEPPDPDILDIDPTCLYIQYKDVLGKGAFKTVYKAFDEVNGLEVAWNQVRIDEVLQSPDDLERLHSEVHLLKSLKHNNIVQFYNSWIDDKNKTVNIITELFTSGSLRQYRKKHKNVELKAVKGWARQILMGLNYLHSHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLATVMQQDTASSVIGTPEFMAPELYDENYNELADIYSFGMCMLEMVTFEYPYSECRNSAQIYKKVTSGIKPAALSKVKDPDTKRFIEKCLVPASQRLSAKELLMDPFLQANGTVRNRPLPLPDIVLPKTGAFGDRCLMSEGPASARNRLLDADSDGEPPAITTFDASVEGGPQSAGVEVQRSKRGILFILKDAGRARNIHFIFYLDSDTALSVSSEMVVQLQLAHQNVTLIAELIDLLLINLVPNWKPCVHIEHLIPPRGRLTPLAHETQSQVKNPIETPPKSHPEDCESCNNSNNASTSQFIPNKPPPFPGLIPPLEEKLNEIMPSSKVEDRWSEMSYVSATSDEYDGNYSIDLYISAGSTGSLDLHQSRYEMGPSSPPYNSKVLDNDIPSGGNQFFPYATSASGLSDDDGGGDDDDEEEEEEEEEEEEEEEEEEEEELTLELGMIELQFEEAMKEVYKKKEEAIKETRRRLSRKKSGSFC 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9190995 9195918 - Conep09aG0128300.1 Cone9ag1249 445412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1249 662 MobiDBLite consensus disorder prediction 590 621 - -
Cone9ag1249 662 SUPERFAMILY Protein kinase-like (PK-like) 34 289 IPR011009 -
Cone9ag1249 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone9ag1249 662 MobiDBLite consensus disorder prediction 555 583 - -
Cone9ag1249 662 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 17 647 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Cone9ag1249 662 Gene3D Phosphorylase Kinase; domain 1 17 112 - -
Cone9ag1249 662 Coils Coil 594 630 - -
Cone9ag1249 662 SMART serkin_6 31 288 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1249 662 FunFam probable serine/threonine-protein kinase WNK9 114 293 - -
Cone9ag1249 662 CDD STKc_WNK 30 288 - -
Cone9ag1249 662 ProSiteProfiles Protein kinase domain profile. 31 288 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1249 662 Pfam Protein kinase domain 33 288 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone9ag1249 662 FunFam Probable serine/threonine-protein kinase WNK1 16 112 - -
Cone9ag1249 662 MobiDBLite consensus disorder prediction 1 20 - -
Cone9ag1249 662 Gene3D Transferase(Phosphotransferase) domain 1 114 296 - -
Cone9ag1249 662 MobiDBLite consensus disorder prediction 466 483 - -
Cone9ag1249 662 Coils Coil 632 652 - -
Cone9ag1249 662 MobiDBLite consensus disorder prediction 455 488 - -
Cone9ag1249 662 MobiDBLite consensus disorder prediction 548 621 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0543 Cone-Chr12:3849828 Cone9ag1249 Cone-Chr9:9190995 1.15E-161 dispersed
Cone7ag0248 Cone-Chr7:1045463 Cone9ag1249 Cone-Chr9:9190995 1.51E-146 dispersed
Cone8ag0540 Cone-Chr8:3975950 Cone9ag1249 Cone-Chr9:9190995 3.67E-160 dispersed
Cone9ag1249 Cone-Chr9:9190995 Cone1ag0972 Cone-Chr1:54878381 3.05E-17 dispersed
Cone6ag1296 Cone-Chr6:10408117 Cone9ag1249 Cone-Chr9:9190995 5.94E-257 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
83206 PF03106 WRKY 5.00E-13 CL0274 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1249 K08867 - vvi:100259251 738.028