Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone9ag1264 | ATGGCAGATGTTGAGGATATCCAGCCCCTTGTTCTTGACAATGGAACTGGAATGATGAAGGCTGGATTCGCTGGGGATGATTCTCCTAGGGTAGTTTTTCCTAGTATCGTCGGTAGACCCAGACGCACCGATATCATGAATGGGTTGGGCCTGAAAGATGCTTATGTCGGCGATGAAGCCCAATCCAAAAGAGGTATCCTTAACTTGAAATATCCTATTGAGAATCGCATAGTCACCAACTGGGATGACATGGAAATGATCTGGCATCACACGTTCTACAATGAGCTTCGTCTTGCCCCTGAAGAACACCCAGTTCTTTTGACAGAGGCTCCACTCAACCGCAGGGGTAACAGAGAAATGATGACCAATATCATGTTTGAAAAATTCAATGTGCCTGCCATGTACATTTCAGTCCAAGCTGTTCTAGCTCTCTATGCCACTGGTCACACAACTGGTATCGTGGTCGATTCTGGTGATGCTGTGACTCACACTGTGCCCATTTACGAGGGATATACTCTTCCTCATGCTATCCTCCGTTTGGATCTCGCTGGACGTGATCTAACTGATGCTTTCATGAAGATTCTTACTGAAAGAGGTTACATGTTCACCACTGCTGCTGAATGGGAAATTGTCCGTGACATGAAGGAAAAACTTGCATACGTTGCTCTTGACTATGAGCAAGAACTTGAAACCGCAATGTGCAGCTCCTCAGTTAAAAAGACGTATGAGTTGCCTGATAGACAAATAATTACAATTGGAGCTGAGAGATTCCGTTGCCCTGAAGCCCTTTTCCAGCCATCTCTTATCGAAATGGAAGCTTTTGGAATCCATGAGGCTACCTACAACTCCATTTTGAAGTGTAATGTGGATATCAGAAAGGATATGTACGGAAAGATTGTTCTTACTGGTGGTTCTACCATGTTCCCTGGCATTGCTAATAGGATGAGCAAGGAGATCACTGCCCTTGCACCTCGCAGCATGAAGATTAAGGTCGTGGCCCCACCAGAAAGGAAATACAGTGTCTGGATTGGAGGGTCTATCCTTGCATCCCTCAGCACCTTCAAGCAGAACTGGATCTCAAAGGACGAGTATTATGAGACCGGCCCAACCATTGTTCATGGGAAGTGCTTCTGA | 1134 | 45.68 | MADVEDIQPLVLDNGTGMMKAGFAGDDSPRVVFPSIVGRPRRTDIMNGLGLKDAYVGDEAQSKRGILNLKYPIENRIVTNWDDMEMIWHHTFYNELRLAPEEHPVLLTEAPLNRRGNREMMTNIMFEKFNVPAMYISVQAVLALYATGHTTGIVVDSGDAVTHTVPIYEGYTLPHAILRLDLAGRDLTDAFMKILTERGYMFTTAAEWEIVRDMKEKLAYVALDYEQELETAMCSSSVKKTYELPDRQIITIGAERFRCPEALFQPSLIEMEAFGIHEATYNSILKCNVDIRKDMYGKIVLTGGSTMFPGIANRMSKEITALAPRSMKIKVVAPPERKYSVWIGGSILASLSTFKQNWISKDEYYETGPTIVHGKCF | 377 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 9364250 | 9366471 | - | Conep09aG0130200.1 | Cone9ag1264 | 445427 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone9ag1264 | 377 | SMART | actin_3 | 7 | 377 | IPR004000 | - | |
Cone9ag1264 | 377 | FunFam | Putative actin-related protein 5 | 341 | 369 | - | - | |
Cone9ag1264 | 377 | CDD | NBD_sugar-kinase_HSP70_actin | 10 | 183 | - | - | |
Cone9ag1264 | 377 | FunFam | Major actin | 257 | 340 | - | - | |
Cone9ag1264 | 377 | Gene3D | - | 140 | 340 | - | - | |
Cone9ag1264 | 377 | PANTHER | ACTIN | 8 | 369 | IPR004000 | - | |
Cone9ag1264 | 377 | ProSitePatterns | Actins signature 1. | 55 | 65 | IPR004001 | - | |
Cone9ag1264 | 377 | Pfam | Actin | 5 | 377 | IPR004000 | - | |
Cone9ag1264 | 377 | FunFam | Actin, alpha skeletal muscle | 36 | 73 | - | - | |
Cone9ag1264 | 377 | Gene3D | Actin; Chain A, domain 4 | 182 | 273 | - | - | |
Cone9ag1264 | 377 | FunFam | Actin, muscle | 182 | 273 | - | - | |
Cone9ag1264 | 377 | SUPERFAMILY | Actin-like ATPase domain | 148 | 377 | IPR043129 | - | |
Cone9ag1264 | 377 | PRINTS | Actin signature | 117 | 130 | IPR004000 | - | |
Cone9ag1264 | 377 | PRINTS | Actin signature | 238 | 254 | IPR004000 | - | |
Cone9ag1264 | 377 | PRINTS | Actin signature | 63 | 85 | IPR004000 | - | |
Cone9ag1264 | 377 | PRINTS | Actin signature | 51 | 62 | IPR004000 | - | |
Cone9ag1264 | 377 | PRINTS | Actin signature | 142 | 161 | IPR004000 | - | |
Cone9ag1264 | 377 | PRINTS | Actin signature | 28 | 37 | IPR004000 | - | |
Cone9ag1264 | 377 | SUPERFAMILY | Actin-like ATPase domain | 6 | 155 | IPR043129 | - | |
Cone9ag1264 | 377 | FunFam | Actin, alpha skeletal muscle | 3 | 163 | - | - | |
Cone9ag1264 | 377 | Gene3D | - | 10 | 371 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone7ag0622 | Cone-Chr7:3099924 | Cone9ag1264 | Cone-Chr9:9364250 | 5.58E-12 | dispersed | |
Cone9ag1250 | Cone-Chr9:9202192 | Cone9ag1264 | Cone-Chr9:9364250 | 9.93E-234 | dispersed | |
Cone6ag1317 | Cone-Chr6:10591365 | Cone9ag1264 | Cone-Chr9:9364250 | 7.59E-215 | wgd | |
Cone8ag0044 | Cone-Chr8:248787 | Cone9ag1264 | Cone-Chr9:9364250 | 1.41E-233 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone9ag1264 | K10355 | - | cit:102577980 | 645.58 |