Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone9ag1264 ATGGCAGATGTTGAGGATATCCAGCCCCTTGTTCTTGACAATGGAACTGGAATGATGAAGGCTGGATTCGCTGGGGATGATTCTCCTAGGGTAGTTTTTCCTAGTATCGTCGGTAGACCCAGACGCACCGATATCATGAATGGGTTGGGCCTGAAAGATGCTTATGTCGGCGATGAAGCCCAATCCAAAAGAGGTATCCTTAACTTGAAATATCCTATTGAGAATCGCATAGTCACCAACTGGGATGACATGGAAATGATCTGGCATCACACGTTCTACAATGAGCTTCGTCTTGCCCCTGAAGAACACCCAGTTCTTTTGACAGAGGCTCCACTCAACCGCAGGGGTAACAGAGAAATGATGACCAATATCATGTTTGAAAAATTCAATGTGCCTGCCATGTACATTTCAGTCCAAGCTGTTCTAGCTCTCTATGCCACTGGTCACACAACTGGTATCGTGGTCGATTCTGGTGATGCTGTGACTCACACTGTGCCCATTTACGAGGGATATACTCTTCCTCATGCTATCCTCCGTTTGGATCTCGCTGGACGTGATCTAACTGATGCTTTCATGAAGATTCTTACTGAAAGAGGTTACATGTTCACCACTGCTGCTGAATGGGAAATTGTCCGTGACATGAAGGAAAAACTTGCATACGTTGCTCTTGACTATGAGCAAGAACTTGAAACCGCAATGTGCAGCTCCTCAGTTAAAAAGACGTATGAGTTGCCTGATAGACAAATAATTACAATTGGAGCTGAGAGATTCCGTTGCCCTGAAGCCCTTTTCCAGCCATCTCTTATCGAAATGGAAGCTTTTGGAATCCATGAGGCTACCTACAACTCCATTTTGAAGTGTAATGTGGATATCAGAAAGGATATGTACGGAAAGATTGTTCTTACTGGTGGTTCTACCATGTTCCCTGGCATTGCTAATAGGATGAGCAAGGAGATCACTGCCCTTGCACCTCGCAGCATGAAGATTAAGGTCGTGGCCCCACCAGAAAGGAAATACAGTGTCTGGATTGGAGGGTCTATCCTTGCATCCCTCAGCACCTTCAAGCAGAACTGGATCTCAAAGGACGAGTATTATGAGACCGGCCCAACCATTGTTCATGGGAAGTGCTTCTGA 1134 45.68 MADVEDIQPLVLDNGTGMMKAGFAGDDSPRVVFPSIVGRPRRTDIMNGLGLKDAYVGDEAQSKRGILNLKYPIENRIVTNWDDMEMIWHHTFYNELRLAPEEHPVLLTEAPLNRRGNREMMTNIMFEKFNVPAMYISVQAVLALYATGHTTGIVVDSGDAVTHTVPIYEGYTLPHAILRLDLAGRDLTDAFMKILTERGYMFTTAAEWEIVRDMKEKLAYVALDYEQELETAMCSSSVKKTYELPDRQIITIGAERFRCPEALFQPSLIEMEAFGIHEATYNSILKCNVDIRKDMYGKIVLTGGSTMFPGIANRMSKEITALAPRSMKIKVVAPPERKYSVWIGGSILASLSTFKQNWISKDEYYETGPTIVHGKCF 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 9364250 9366471 - Conep09aG0130200.1 Cone9ag1264 445427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone9ag1264 377 SMART actin_3 7 377 IPR004000 -
Cone9ag1264 377 FunFam Putative actin-related protein 5 341 369 - -
Cone9ag1264 377 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Cone9ag1264 377 FunFam Major actin 257 340 - -
Cone9ag1264 377 Gene3D - 140 340 - -
Cone9ag1264 377 PANTHER ACTIN 8 369 IPR004000 -
Cone9ag1264 377 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Cone9ag1264 377 Pfam Actin 5 377 IPR004000 -
Cone9ag1264 377 FunFam Actin, alpha skeletal muscle 36 73 - -
Cone9ag1264 377 Gene3D Actin; Chain A, domain 4 182 273 - -
Cone9ag1264 377 FunFam Actin, muscle 182 273 - -
Cone9ag1264 377 SUPERFAMILY Actin-like ATPase domain 148 377 IPR043129 -
Cone9ag1264 377 PRINTS Actin signature 117 130 IPR004000 -
Cone9ag1264 377 PRINTS Actin signature 238 254 IPR004000 -
Cone9ag1264 377 PRINTS Actin signature 63 85 IPR004000 -
Cone9ag1264 377 PRINTS Actin signature 51 62 IPR004000 -
Cone9ag1264 377 PRINTS Actin signature 142 161 IPR004000 -
Cone9ag1264 377 PRINTS Actin signature 28 37 IPR004000 -
Cone9ag1264 377 SUPERFAMILY Actin-like ATPase domain 6 155 IPR043129 -
Cone9ag1264 377 FunFam Actin, alpha skeletal muscle 3 163 - -
Cone9ag1264 377 Gene3D - 10 371 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone7ag0622 Cone-Chr7:3099924 Cone9ag1264 Cone-Chr9:9364250 5.58E-12 dispersed
Cone9ag1250 Cone-Chr9:9202192 Cone9ag1264 Cone-Chr9:9364250 9.93E-234 dispersed
Cone6ag1317 Cone-Chr6:10591365 Cone9ag1264 Cone-Chr9:9364250 7.59E-215 wgd
Cone8ag0044 Cone-Chr8:248787 Cone9ag1264 Cone-Chr9:9364250 1.41E-233 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone9ag1264 K10355 - cit:102577980 645.58